Pairwise Alignments

Query, 304 a.a., AEC family transporter from Methanococcus maripaludis S2

Subject, 312 a.a., malonate transporter from Agrobacterium fabrum C58

 Score = 53.9 bits (128), Expect = 5e-12
 Identities = 70/302 (23%), Positives = 134/302 (44%), Gaps = 30/302 (9%)

Query: 13  LILIGYISRHFKILDEKDRMVLNKIVIYIAMPATIFLQLLTNVAPSDLPEFMKLPIIIFI 72
           LI IGY +        +    LN  +IY A+PA +F +L++     +L   M        
Sbjct: 14  LIFIGYGAARITKQPVEAMGWLNTFIIYAALPA-LFFKLVSKTPVEELAR-MDFVAASLA 71

Query: 73  STAACALLAYIAGK---RLKLDNKSLGGFVLVASIGNTGFLGYPVILGFYGEQGLLRA-- 127
            T    L  ++ G+   R  L   ++  F   AS GN G++G  + L   GE+  +    
Sbjct: 72  CTYGIFLAVFLIGRFVRRNSLAETTIQSFA--ASYGNIGYMGPGLALLALGEKAAVPVAL 129

Query: 128 IFCDMSA---IFCSMLLGTYIGVKLSGAKKS--ILKEVFTFPPLFTGIFTLILVLLHVNL 182
           I C  +A   I    ++    G K S  K +  + ++V T P     I ++I   L  +L
Sbjct: 130 IVCLENAAHFIVAPAMMAVAGGDKRSAGKLALDVARKVITHP----FIVSVIAGFLAASL 185

Query: 183 SIFP-EFFTKSLEYMSSATIPLIMLSLGLSLSPKAAKFGIFYGILASIFRMVISPLVAFP 241
           S  P E   + ++Y++ +  P  + ++G++L+ +  K      +   I  +V + L+  P
Sbjct: 186 SWQPPEAVQRLVDYLAQSAAPCALFAMGVTLALRPMK-----RVPVEISYIVPAKLILHP 240

Query: 242 ISESILSNQLDK------QVTIMQSAMPSAMMPLVYAVIYDLDVKLVASACFVSTVVSLF 295
           ++  ++ + L +         ++ +A+P+A    V    Y +  +  ++   +STV+S+F
Sbjct: 241 LAAYLVLSSLGRFEPVWIYSAVLLAALPTATNVFVIGQQYHVWQERASATILISTVLSVF 300

Query: 296 AL 297
            L
Sbjct: 301 TL 302