Pairwise Alignments

Query, 500 a.a., flippase from Methanococcus maripaludis S2

Subject, 411 a.a., flippase from Methanococcus maripaludis S2

 Score = 61.2 bits (147), Expect = 7e-14
 Identities = 85/446 (19%), Positives = 175/446 (39%), Gaps = 49/446 (10%)

Query: 1   LSYKERMIKGASWNFLFLVLAAPIGYFVRILYANSLSKVEVGLFYAILDLISMVSIFRGL 60
           +  K++++  +S  F    L + I Y + ++   +     +G +  I+   + V+     
Sbjct: 1   MDLKKKVLLNSSQLFGGQFLHSIISYAIVLMIGRTFGTEGLGQYSFIIAFTAFVAYIADF 60

Query: 61  GLNNTVIYFIPKFLVQNRKDLIKSTLISVLLIQTIMAVLMAVLMYLISPTLINKYINNQG 120
           G+   ++  I K   QN   + KS  I V L   I+   + V + +        +IN   
Sbjct: 61  GIEYYLLREIAKDN-QNYDLISKSFGIKVFL--GILCWFLIVFLTI--------FINKDP 109

Query: 121 QFGDISLIFVVFTIMIFGYYIFDGTKALLFNSFQGFQSQKIYGTCNFLNI-LSILILSII 179
                    V   I+I+G      +  LLF S         Y + + L   +  LI+  +
Sbjct: 110 --------LVKLAIIIYGLASICSSIGLLFKSIIHANMVSKYESISILTERILTLIVGGV 161

Query: 180 FIYFGAGLYSPALAYTITPLIMILI---YGKIFLKEVFPEFFTEKITFSKELLNDIFSYG 236
            +YF   L+   +  T+   I+ ++   Y   + K        + I   K+     F Y 
Sbjct: 162 LLYFTKNLFLFMVVLTLDIFILNILRYNYASKYAKIRLKFNLKDGINILKKSYFFWFIYV 221

Query: 237 MPIMFGSAGFIIMGYLDSICLTYFTGLNAVADYRN--------VAMPTVLVLSYFASAIC 288
              ++ +   +++G + S         ++V  YR         + +P V++     S + 
Sbjct: 222 FSFIYYNTDILMLGIMQSD--------SSVGIYRGGYFFIQAAMIIPVVVI-----STVM 268

Query: 289 KVILPMSTEMWEKGEKKNLSDGLKKILSYSFIISVPFAVILAYFPTELVNIFFNENYLTA 348
             I  + TE      ++ L    KK   +   + +   ++L       + +FF   ++ +
Sbjct: 269 PSISILHTE-----NRELLKTLFKKAFIFLSFLGISLNLVLFIGSQSFIGLFFGNEFVES 323

Query: 349 APTMSILSFGVIFLSMNTIVFDIFNGIGKPHLSAKILYIGALFNLIFNLLLIPKFGTIGA 408
              + I+SF +I + +N++   + N  G     AK+L   A+ N+  N LLIP     G 
Sbjct: 324 ILVLQIMSFSIISIFLNSLYGSLLNATGNEKKYAKVLGFSAILNVCLNFLLIPSMSYAGV 383

Query: 409 AFATTLCYILIQILQTRYLGKFLDYK 434
           A +T +   ++ ++     G+ ++ K
Sbjct: 384 AVSTLISNWVVTVILMFSCGRVINLK 409