Pairwise Alignments

Query, 500 a.a., flippase from Methanococcus maripaludis S2

Subject, 508 a.a., Membrane protein involved in the export of O-antigen and teichoic acid from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 58.9 bits (141), Expect = 4e-13
 Identities = 102/509 (20%), Positives = 208/509 (40%), Gaps = 31/509 (6%)

Query: 5   ERMIKGASWNFLFLVLAAPIGYFVRILYANSLSKVEVGLFYAILDLISMVSIFRGLGLNN 64
           +++  G+ W     VL A   +    L  +   K + GL      L + + +   LG+N 
Sbjct: 8   KKIFSGSVWGIAAKVLDALAKFVTIPLLVSFYGKTDYGLIALAFSLNAYLRLM-DLGMNI 66

Query: 65  TVIYFIPKFLVQNRKDLIKSTLISVLLIQTIMAVLMAVLMYLISPTLINKYINNQGQFGD 124
             + +   +  +   D I +   S ++   ++ ++ A++   ++    + +  +Q Q   
Sbjct: 67  GSVRYFAMWESKGEYDKIATASRSSMVFYGLIGLVNALIFVWMADHGPDFFNISQDQAPT 126

Query: 125 ISLI-FVVFTIMIFGYYIFDGTKALLFNSFQGFQSQKIYGTCNFLNILSILILSIIFIYF 183
             ++ +++    +F +      + L      GF   +I    + LN L    +++  I+F
Sbjct: 127 YRIMMYILAASTVFNWLSNVVIQLLSAKDELGFV-HRITVISSVLNFL----IALAAIHF 181

Query: 184 GAGLYSPALAYTITPLIMILIYGKIFLKEVFPEFFTEKITFSK---ELLNDIFSYGMPIM 240
              L    L YT++  +M++I   +   + +P     K+   K   ++   I  Y M I 
Sbjct: 182 QWSLEVYFLFYTLS--LMVVIPLNVLRLKRYP-LPLRKLLLPKWDGKVFKQILGYSMAIF 238

Query: 241 -FGSAGFIIMGYLDSICLTYFTGLNAVADYRNVAMPTVLVLSYFASAICKVILPMSTEMW 299
             G   F        +   + TG++ + DYR +     LV+S F S   +V+LP +++  
Sbjct: 239 AMGLFQFSAKELRPILLAKFATGIDVLTDYRVIQTIANLVMS-FGSIFLQVLLPSASKAH 297

Query: 300 EKGEKKNLSDGLKKILSY--SFIISVPFAVILAYFPTELVNIFFNENYLTAAPTMSILSF 357
            + ++  +   + +   Y   F+  V FA+IL      L+ ++  E+Y   +  + I   
Sbjct: 298 AENDQHKMEKMVFEATRYIAIFLTLVVFALILN--AENLLVLYMGESYADLSKWLIIWLL 355

Query: 358 GVIFLSMNTIVFDIFNGIGKPHLSAKILYIGALFNLIFNLLLIPKFGTIGAAFATTLCYI 417
            V+    NT V  +    GK         IG + +L   ++  P+ G +GAA    L Y+
Sbjct: 356 TVLLSMHNTPVASLVLSSGKTKALVYSAAIGCILSLPITVVFAPEMG-VGAAVMGYLVYM 414

Query: 418 LIQI--LQTRYLGKFLDYKFPLKNFFLCLFSSSISIVPLLIIKSM------ILNEYVLIL 469
           LIQ+      Y+ K L +    + FF     S +  V    +  +      +   Y+ + 
Sbjct: 415 LIQMGFFYFYYIPKVL-HMSSARIFFKAFSPSLLGAVLAWFLAYLTGTLVDLAQPYLAMA 473

Query: 470 FSGVLYFLTY--FLSIYVLKVDDLKEIKS 496
               ++ L +  F   +V+K  D+  +KS
Sbjct: 474 LQTTVFLLVFAGFHGAFVIKRSDIDYLKS 502