Pairwise Alignments

Query, 320 a.a., radical SAM protein from Methanococcus maripaludis S2

Subject, 355 a.a., PqqA peptide cyclase from Xanthobacter sp. DMC5

 Score = 62.4 bits (150), Expect = 2e-14
 Identities = 41/132 (31%), Positives = 63/132 (47%), Gaps = 5/132 (3%)

Query: 38  KPLFIKIETVNYCNSQCKYCPHPKMTREKGL-ISDELFNKIAKELVNWGVKAVHLTNFGE 96
           KP+ + +ET N CN  C  CP      E    +S ELF  I  ++ +     +H    GE
Sbjct: 30  KPVCLYLETTNRCNLLCTTCPRTYEELEPPADMSWELFTSIVDQIPDLERCVLH--GVGE 87

Query: 97  SLLDPKITERIDYLKNLDNDLYITIITNGFALSEKNIDKILNSNLDEIQISFDGFSKEHY 156
            +L P +   + YLK  D   Y+   TNG  L+EKN   ++ + LDE+++S D  +   Y
Sbjct: 88  PMLVPDLDRMVRYLK--DRGTYVLFNTNGTVLTEKNGRAMIAAGLDELRVSLDAANAHSY 145

Query: 157 EFYRTPFKYENI 168
              R    ++ I
Sbjct: 146 RAIRGKNYFDRI 157



 Score = 33.1 bits (74), Expect = 1e-05
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 6/71 (8%)

Query: 237 CIDIYTYMTILRNGDVVPCCL-DFDGK----INLGNCNEDTLQEIWENEKYTNFRNLVFN 291
           C   +T M    NG  +PCC+  F  +      LG+    +L +IW  + Y  FR  + +
Sbjct: 280 CRRPWTVMYFTANGRALPCCIAPFSQRGYENYTLGDATTQSLSDIWHGDAYKAFRAGLLS 339

Query: 292 DVRNIDLCKNC 302
           +      C NC
Sbjct: 340 ETPPA-ACANC 349