Pairwise Alignments

Query, 318 a.a., calcium/sodium antiporter from Methanococcus maripaludis S2

Subject, 348 a.a., conjugal transfer protein TraR from Pseudomonas simiae WCS417

 Score =  140 bits (354), Expect = 3e-38
 Identities = 94/315 (29%), Positives = 162/315 (51%), Gaps = 26/315 (8%)

Query: 9   LAAGLFMLSYGSDWFVLGASRVAKQFNISSFVIGATIVAFGTSLPEIVTSAYAASTGSVE 68
           + +GL +L  G++  V  A R+A    +   +IG TIVAFG+S P++  S  A   G+ +
Sbjct: 1   MVSGLVLLIIGAEILVRAAVRLAASLKVRPLIIGLTIVAFGSSAPQMTVSLQATLAGNTD 60

Query: 69  LAVGNALGSCIANIGLVLGLSLIISTVFIKNRSV-LKNGYLYIIYTIIFTAIGYNGFSFF 127
           +AVG+ +GS I NI + LGLS +I  + +  + V L    + +   ++FT       +  
Sbjct: 61  IAVGSVIGSSIFNILVTLGLSALIIPLRVSRQLVRLDIPVMILAGLLVFTLAANEALTPL 120

Query: 128 DGIFLLFLLLVYV----VYTIKSGEMDDEEHEKSITFKKAIIYLLIGLLFVILGSSFFVD 183
           DG+ LL  L+ Y+      T  S      +      +  +++ +L GLL ++L     + 
Sbjct: 121 DGLVLLVALVAYLGVLHYQTRHSRRPRTLDTVARAPWLSSVLLMLGGLLILVLAGHLLLG 180

Query: 184 GAKGLASAFGVSEKIIGFTIVAFGTSLPELSVSFAAARQKLGGIVIGNVIGSNIANMFGA 243
            A  +A   G+SE++IG T++  GTSLP L+ S  AA +    I +GNVIGSN+ N+ G 
Sbjct: 181 AAVDVAGDLGLSERVIGLTLIGVGTSLPCLATSLIAALRGEREIAVGNVIGSNLFNLLGV 240

Query: 244 LAIASIIHEIP------AVKFELSVNILMVLLLIAMMSKEKIKAVLNLNSTKEYLSKITK 297
           L + +++   P      A+ F+L V + +V+L + +                    ++T+
Sbjct: 241 LGLTALLAPSPLSVSPNALDFDLPVMLGVVVLCLPVFYTG---------------YRVTR 285

Query: 298 ADGLILILIYLLFVL 312
           A+GL+L+ +YL + L
Sbjct: 286 AEGLVLLGLYLAYGL 300



 Score = 63.9 bits (154), Expect = 5e-15
 Identities = 45/146 (30%), Positives = 77/146 (52%), Gaps = 4/146 (2%)

Query: 3   IESVLFLAAGLFMLSYGSDWFVLGASRVAKQFNISSFVIGATIVAFGTSLPEIVTSAYAA 62
           + SVL +  GL +L       +  A  VA    +S  VIG T++  GTSLP + TS  AA
Sbjct: 158 LSSVLLMLGGLLILVLAGHLLLGAAVDVAGDLGLSERVIGLTLIGVGTSLPCLATSLIAA 217

Query: 63  STGSVELAVGNALGSCIANIGLVLGLSLII--STVFIKNRSVLKNGYLYIIYTIIFTAIG 120
             G  E+AVGN +GS + N+  VLGL+ ++  S + +   ++  +  + +   ++   + 
Sbjct: 218 LRGEREIAVGNVIGSNLFNLLGVLGLTALLAPSPLSVSPNALDFDLPVMLGVVVLCLPVF 277

Query: 121 YNGF--SFFDGIFLLFLLLVYVVYTI 144
           Y G+  +  +G+ LL L L Y ++ +
Sbjct: 278 YTGYRVTRAEGLVLLGLYLAYGLHVM 303