Pairwise Alignments

Query, 494 a.a., succinate dehydrogenase/fumarate reductase iron-sulfur subunit from Methanococcus maripaludis S2

Subject, 650 a.a., putative dimethylglycine dehydrogenase subunit from Pseudomonas putida KT2440

 Score =  100 bits (250), Expect = 1e-25
 Identities = 94/362 (25%), Positives = 156/362 (43%), Gaps = 41/362 (11%)

Query: 137 CIDCLSCIAMCPARKYSNYPGPTLMRQL----------ARFAFDPKDEIDREKEAFD--- 183
           C+ C  C AMCPA        P  + Q           A+FA  P       +   +   
Sbjct: 245 CVQCGKCEAMCPAFAAGQPLNPKKLIQDMVIGLAGGTDAQFAGSPYPGKPIGEHGGNPHQ 304

Query: 184 ---------ENIYNCTTCGRCVEVCPKEIDIVHNAVEKLREKTFKKGYNLDSHLEVRKNV 234
                    E +++CTTC  CVE CP  I+ V   V+  R  T +KG   +   EV  N+
Sbjct: 305 PIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEKGATPNKGAEVLDNL 364

Query: 235 LSQNRS---VPKEKTSFLEEVSDEYIVENEKMRVAFFTG-CLVDFRLQEIGKSAIRVLNA 290
           ++ +      P  + ++  +++ + + E +   V F+ G    D R Q   +S ++VL A
Sbjct: 365 IATDNPGGFAPGGRMNWAADLNLQLLSEVKVTEVLFWVGDGAFDMRNQRTLRSFVKVLKA 424

Query: 291 HGVS-VIIPKNQVCCGSPFIRTGQTDISESLKKQNLEIFNKLNVDSVVTLCAGCGSTLKN 349
            GV   ++   +   G    R G     + L K+N++   K     +VT        LKN
Sbjct: 425 SGVDFAVLGLEERDSGDVARRLGDEATFQQLAKRNIQTLAKYKFQRIVTCDPHSFHVLKN 484

Query: 350 DYKE--KKFKVMDITEVLVKVGLIDYKPLDI------TVTYHDPCHLRRGQKVYLEPRKI 401
           +Y      ++V   +  + +  LI  K L++      +VTYHDPC+L R    Y  PR++
Sbjct: 485 EYGALGGDYQVQHHSTYIAE--LIAAKKLNLGQHKGGSVTYHDPCYLGRYNGEYEAPREV 542

Query: 402 LESIPKLKFIEME---IPDQCCGAGGGVRSGKPEVAEAIGKRKANMIYATDADYLITVCP 458
           L+++  ++  EM+      +CCG GGG         + I   + + I  T+A+ +   CP
Sbjct: 543 LKAL-GIEVREMQRSGFRSRCCGGGGGAPITDIPGKQRIPDMRMDDIRETEAELVAVGCP 601

Query: 459 FC 460
            C
Sbjct: 602 QC 603