Pairwise Alignments

Query, 476 a.a., cysteine--tRNA ligase from Methanococcus maripaludis S2

Subject, 458 a.a., Cysteinyl-tRNA synthetase (EC 6.1.1.16) from Variovorax sp. SCN45

 Score =  362 bits (928), Expect = e-104
 Identities = 193/468 (41%), Positives = 288/468 (61%), Gaps = 25/468 (5%)

Query: 2   LKVYNTLTRCEEEFKTLNEKEVKMYVCGPTVYDNTHLGHGRTYVSFDIIRRYLEHMGYTV 61
           L++YNTL+R  EEF  L   +V+MYVCG TVYD  H+GH R  ++FD+++R+L    Y V
Sbjct: 3   LRIYNTLSRELEEFSPLQPGQVRMYVCGMTVYDFCHIGHARMMMAFDVVQRWLRASDYAV 62

Query: 62  NLVINFTDIDDKIIKRAYEKEKDPKEISEQFIKVFLDDMATLKVKPADIYPKVTEHISEI 121
             V N TDIDDKII R+ ++    +E++++ I    +D+  L ++P  I P+ TE++ ++
Sbjct: 63  AYVRNITDIDDKIIARSVQRGITIRELTDEVIAAMHEDIGALGIEPPTIEPRATEYVPQM 122

Query: 122 IAFIEKLIEKGFAYKTEDG-VYFEVKKFKNYGKLSNINLEDLVSGARIETSEKKKNQKDF 180
           +  IEKL  KG AY++++G V + V+KF  YGKLS  +L++L +G R+   + K++  DF
Sbjct: 123 LGIIEKLEHKGLAYRSDNGDVNYAVRKFPGYGKLSGKSLDELHAGERVAVLDGKQDPLDF 182

Query: 181 ALWKTAKPGEP---KWESPFGSGRPGWHIECSAMSSKYLGEQFDIHGGGRDLSFPHHENE 237
            LWK AKP EP   KWES +G+GRPGWHIECSAMS   LGE FDIHGGG DL FPHHENE
Sbjct: 183 VLWKAAKPTEPADAKWESAYGTGRPGWHIECSAMSCATLGETFDIHGGGADLQFPHHENE 242

Query: 238 IAQSSAYSGKDWVNYWLHTGFVMVNGEKMSKSLGNFVTIGDISKEYSPEILRFFFIQRHY 297
           IAQS   +GK    +W+H GFV V+ EKMSKSLGNF TI ++ ++Y  E LRFF ++ HY
Sbjct: 243 IAQSEGANGKPLSRFWVHNGFVRVDNEKMSKSLGNFFTIREVLQKYDAESLRFFLVRTHY 302

Query: 298 RSPIDYTAESMNHVKNNLEKIYNVIENIRISLEKSEKSRTWDENEFLLYDILKNSKNNFY 357
           RS ++Y+   ++  +N+L+++Y  ++ +      ++ S  W +               F 
Sbjct: 303 RSALNYSDAHLDDARNSLKRLYTALDLV----APADVSIDWTQ----------PYAARFK 348

Query: 358 NAMNSDFNTVKALKSVFEVSNGVNKYLSLTKTPSEGLLLKALDFYKIIGEIFGLFENYFK 417
            AM+ DF T +A+  +FE++  VN+    TK+     LLKAL     +G + G   ++ +
Sbjct: 349 AAMDEDFGTPEAIAVLFELAGEVNR----TKSAETAGLLKAL--AGSLGLLQGDPRSFLQ 402

Query: 418 ESSDSDEEEFVTFLIELRSDVRLQKNYEMSDKIRDGLKNLGYQIEDNP 465
             S  D+      + E R+  +  KN+  +D+IR  L   G  ++D+P
Sbjct: 403 AGSTLDDAAIQARIAE-RAAAKAAKNFAEADRIRQELLEQGIVLKDSP 449