Pairwise Alignments

Query, 476 a.a., cysteine--tRNA ligase from Methanococcus maripaludis S2

Subject, 461 a.a., Cysteinyl-tRNA synthetase (EC 6.1.1.16) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  353 bits (906), Expect = e-102
 Identities = 189/482 (39%), Positives = 289/482 (59%), Gaps = 34/482 (7%)

Query: 2   LKVYNTLTRCEEEFKTLNEKEVKMYVCGPTVYDNTHLGHGRTYVSFDIIRRYLEHMGYTV 61
           LK+YNTL+R  E+F+ +    V+MYVCG T+YD  H+GH R  ++FD+++R+L+  G  V
Sbjct: 3   LKIYNTLSRRLEDFQPIEPGHVRMYVCGMTIYDLCHIGHARMMMAFDVVQRWLKVSGLRV 62

Query: 62  NLVINFTDIDDKIIKRAYEKEKDPKEISEQFIKVFLDDMATLKVKPADIYPKVTEHISEI 121
             V N TDIDDKIIKRA E+    + ++++       D+  L ++P  + P+ TE++ ++
Sbjct: 63  TYVRNITDIDDKIIKRALERGITLRALTDEMTAAMHQDIGALGIEPPSLEPRATEYVPQM 122

Query: 122 IAFIEKLIEKGFAYKTEDG-VYFEVKKFKNYGKLSNINLEDLVSGARIETSEKKKNQKDF 180
           ++ IE L  KG AY+ ++G V + V+KF  YGKLS  +L+DL +G R+  +  K +  DF
Sbjct: 123 LSLIETLRGKGLAYQADNGDVNYAVRKFPGYGKLSGKSLDDLRAGERVAVASDKNDPLDF 182

Query: 181 ALWKTAKPGEP---KWESPFGSGRPGWHIECSAMSSKYLGEQFDIHGGGRDLSFPHHENE 237
            LWK+AKP EP   KW+S +G+GRPGWHIECSAMS   LGE FDIHGGG DL FPHHENE
Sbjct: 183 VLWKSAKPEEPAEAKWDSAYGAGRPGWHIECSAMSCSTLGETFDIHGGGADLQFPHHENE 242

Query: 238 IAQSSAYSGKDWVNYWLHTGFVMVNGEKMSKSLGNFVTIGDISKEYSPEILRFFFIQRHY 297
           IAQS   +GK    +W+H GFV V+ EKMSKSLGNF TI ++  +Y PE +RFF ++ HY
Sbjct: 243 IAQSEGATGKPLARFWVHNGFVRVDNEKMSKSLGNFFTIREVLAKYDPETVRFFILRAHY 302

Query: 298 RSPIDYTAESMNHVKNNLEKIYNVIENIRISLEKSEKSRTWDENEFLLYDILKNSKNNFY 357
           RS ++Y+   ++  +  L+++Y  + ++      ++    W++               F 
Sbjct: 303 RSALNYSDAHLDDARGALKRLYTALSHVP---PAAQAQIDWNQPH----------AERFR 349

Query: 358 NAMNSDFNTVKALKSVFEVSNGVNKYLSLTKTPSEGLLLKALDFYKIIGEIFGLFE---- 413
            AM+ DF T +A+  +FE++  VN+    +K      LL+AL      G   GL +    
Sbjct: 350 AAMDEDFGTPEAVAVLFELAGEVNR----SKDAGLAGLLRAL------GGTLGLLQADPA 399

Query: 414 NYFKESSDSD--EEEFVTFLIELRSDVRLQKNYEMSDKIRDGLKNLGYQIEDNPKEGTVF 471
           +Y +        +E  +  LI+ R+  +  K++  +D+IR  L   G  ++D+P  GT +
Sbjct: 400 SYLQGGGAEGGLDETAILDLIDQRTTAKQSKDFTGADRIRQQLLEQGIVLKDSP-AGTTW 458

Query: 472 KK 473
           ++
Sbjct: 459 ER 460