Pairwise Alignments

Query, 476 a.a., cysteine--tRNA ligase from Methanococcus maripaludis S2

Subject, 460 a.a., Cysteine--tRNA ligase from Alteromonas macleodii MIT1002

 Score =  390 bits (1003), Expect = e-113
 Identities = 206/479 (43%), Positives = 292/479 (60%), Gaps = 26/479 (5%)

Query: 1   MLKVYNTLTRCEEEFKTLNEKEVKMYVCGPTVYDNTHLGHGRTYVSFDIIRRYLEHMGYT 60
           ML +YNT TR + +F  L E +V +YVCG TVYD +H+GH RTY+SFD++ RY+ H+G  
Sbjct: 1   MLHLYNTRTREKAKFVPLQEGKVGLYVCGITVYDLSHMGHARTYLSFDVLVRYMRHLGLD 60

Query: 61  VNLVINFTDIDDKIIKRAYEKEKDPKEISEQFIKVFLDDMATLKVKPADIYPKVTEHISE 120
           V  V N TDIDDKII RA E  +  + ++ + I +  +D A + +   D+ P V+ H+ E
Sbjct: 61  VKYVRNITDIDDKIIARANENGESFEALTARTIAMMHEDFAAINLLEPDVEPTVSGHMDE 120

Query: 121 IIAFIEKLIEKGFAYKTEDG-VYFEVKKFKNYGKLSNINLEDLVSGARIETSEKKKNQKD 179
           IIA I++L++KG+AY+ + G V F+V K+++YGKLS  +L+ L +GAR+E +  K +  D
Sbjct: 121 IIAIIQRLMDKGYAYQAKSGDVLFDVSKYEDYGKLSKQDLDQLKAGARVEVAAGKDDPLD 180

Query: 180 FALWKTAKPGEPKWESPFGSGRPGWHIECSAMSSKYLGEQFDIHGGGRDLSFPHHENEIA 239
           F LWKT KPGEP W+SP+G GRPGWHIECSAM+ K+LG  FDIHGGG DL+FPHHENE+A
Sbjct: 181 FVLWKTTKPGEPAWQSPWGEGRPGWHIECSAMNHKHLGAHFDIHGGGSDLTFPHHENEVA 240

Query: 240 QSSAYSGKDWVNYWLHTGFVMVNGEKMSKSLGNFVTIGDISKEYSPEILRFFFIQRHYRS 299
           QS       +VN W+H G V VN EKMSKSLGNF T+ D+ KE+  E LRFF +  HYRS
Sbjct: 241 QSCCAYDTPYVNVWMHAGMVQVNDEKMSKSLGNFFTLRDVLKEHDSETLRFFLMSAHYRS 300

Query: 300 PIDYTAESMNHVKNNLEKIYNVIENIRISLEKSEKSRTWDENEFLLYDILKNSKNNFYNA 359
            + Y+ +++   K  LE++Y  +  + +           DE+  L Y         F  A
Sbjct: 301 QLSYSQDNITQAKAALERLYTALRGVEV-----------DESTDLSYG---GYLKRFEAA 346

Query: 360 MNSDFNTVKALKSVFEVSNGVNKYLSLTKTPSEGLLLKALDFYKIIGEIFGLFEN----Y 415
           MN D N  +A   +F+V+  +N+          G L   L   K +G I G+ ++    +
Sbjct: 347 MNDDLNVPEAFSVLFDVARELNR--QKDNVEEAGKLAAVL---KGLGAILGMLQSDPDTF 401

Query: 416 FKESSDSDEEEF-VTFLIELRSDVRLQKNYEMSDKIRDGLKNLGYQIEDNPKEGTVFKK 473
            K    +D+E   +  LI+ R+D R  K++  +D  RD L   G  +ED P  GT ++K
Sbjct: 402 LKGGEGNDDEAAEIEALIKQRNDARASKDWAAADAARDALNAKGVVLEDGP-SGTTWRK 459