Pairwise Alignments

Query, 476 a.a., cysteine--tRNA ligase from Methanococcus maripaludis S2

Subject, 461 a.a., cysteinyl-tRNA synthetase from Agrobacterium fabrum C58

 Score =  300 bits (768), Expect = 7e-86
 Identities = 179/484 (36%), Positives = 255/484 (52%), Gaps = 54/484 (11%)

Query: 2   LKVYNTLTRCEEEFKTLNEKEVKMYVCGPTVYDNTHLGHGRTYVSFDIIRRYLEHMGYT- 60
           LK++NTLTR + EF  ++   V+MYVCGPTVYD  H+G+ R  + FD++ R L H+    
Sbjct: 5   LKLHNTLTREKSEFAPIDADNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYGED 64

Query: 61  -VNLVINFTDIDDKIIKRAYEK------EKDPKEISEQFIKVFLDDMATLKVKPADIYPK 113
            V    N TD+DDKI  RA               ++++    F DD+A L      + P+
Sbjct: 65  HVTYARNITDLDDKINARALRDYPHLPLNDAIHAVTKKTADQFHDDVAALGCLQPTVEPR 124

Query: 114 VTEHISEIIAFIEKLIEKGFAYKTEDGVYFEVKKFKNYGKLSNINLEDLVSGARIETSEK 173
            T++I+E+I  IE+LIE+G AYK    V F+ +   +YG+LS   L++  +GAR+     
Sbjct: 125 ATDYIAEMIYLIERLIERGHAYKAGGEVLFDTRSMADYGQLSKRPLDEQQAGARVAVEAH 184

Query: 174 KKNQKDFALWKTAKPGEPKWESPFGSGRPGWHIECSAMSSKYLGEQFDIHGGGRDLSFPH 233
           KKN  DF LWK +   EP WESP+G GRPGWHIECSAM+ +YLGE FDIHGGG DL FPH
Sbjct: 185 KKNPGDFVLWKLSSESEPGWESPWGLGRPGWHIECSAMAGRYLGEVFDIHGGGLDLIFPH 244

Query: 234 HENEIAQSSAYSGKD-WVNYWLHTGFVMVNGEKMSKSLGNFVTIGDI-------SKEYSP 285
           HENEIAQS    G     N W+H GFV V G KMSKS GNFVTI ++        +++  
Sbjct: 245 HENEIAQSRCAHGTHVMANVWMHNGFVQVEGRKMSKSEGNFVTIYELLHTDKFGGRQWPG 304

Query: 286 EILRFFFIQRHYRSPIDYTAESMNHVKNNLEKIYNVIENIRISLEKSEKSRTWDENEFLL 345
           E+LR   +  HYR PID++ + +   +  L K          + E S+ +          
Sbjct: 305 EVLRLAMLMTHYREPIDFSVKRLEEAERLLSKWP--------AAETSDAA---------- 346

Query: 346 YDILKNSKNNFYNAMNSDFNTVKALKSVFEVSNGVNKYLSLTKTPSEGLLLKALDFYKII 405
                 +      A+  D NTV A++++  +++  N        PS       L  +   
Sbjct: 347 ------ADETVLEALADDLNTVAAVQALHALAHAANT------DPSR------LPAFAAS 388

Query: 406 GEIFGLFENYFKESSDSDEEEFVTFLIELRSDVRLQKNYEMSDKIRDGLKNLGYQIEDNP 465
             + G+     K   D      V  L+ELR ++   KN+  +D++RD L   G Q++D  
Sbjct: 389 AALLGVLPK--KTEMDEAIVSAVDALVELRLEMLKAKNFAEADRLRDELSEKGIQLKDGK 446

Query: 466 KEGT 469
            + T
Sbjct: 447 DKET 450