Pairwise Alignments

Query, 184 a.a., CoB--CoM heterodisulfide reductase subunit C from Methanococcus maripaludis S2

Subject, 393 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

 Score = 44.3 bits (103), Expect = 3e-09
 Identities = 37/156 (23%), Positives = 59/156 (37%), Gaps = 28/156 (17%)

Query: 25  EKEVASLKSCYQCGTCTGSCPSGRRTAYRTRKVIRQALLGIDSVLD-SDDIWKCTTCYTC 83
           E  V    SC  CG C  SCP+        RK  ++ L  +  +++   D   C +C TC
Sbjct: 75  EMPVFDAGSCINCGNCVESCPTNVLEMGTLRKEAKELLWNVPKIINLLIDEEVCVSCGTC 134

Query: 84  YERCPRDVKVTEIIKTIRNLAAQKGNMAKPHKMTAVYVLKAGHAVPANDDTAKLRKSIGL 143
              CP D                    A  H  T +Y +     V   +           
Sbjct: 135 ENACPVD--------------------AISHNNTGLYEIDVNLCVSCKNCLK------AC 168

Query: 144 AEKAPIAQFSQKDMDELRTLAKNLKFD-ELIGFDWK 178
             +  I  +S+ ++ E   +A+N+KFD E +G ++K
Sbjct: 169 PVENAIVTYSEPELSEKIEIAQNIKFDRERLGSEFK 204



 Score = 26.2 bits (56), Expect = 8e-04
 Identities = 23/97 (23%), Positives = 32/97 (32%), Gaps = 29/97 (29%)

Query: 23  PGEKEVASLK--SCYQCGTCTGSCPS---------------------------GRRTAYR 53
           PG  ++  LK  SC + G C   CP+                           G R  YR
Sbjct: 232 PGSIDLERLKVTSCIKSGKCLEVCPTTAIRIGVPEKITKRTAECYIVDEEKCIGCRICYR 291

Query: 54  TRKVIRQALLGIDSVLDSDDIWKCTTCYTCYERCPRD 90
           +  V    L+  ++ L   +   C  C  C   CP D
Sbjct: 292 SCNVPEAILISKETNLPYINPEYCVRCGLCQNACPVD 328



 Score = 25.0 bits (53), Expect = 0.002
 Identities = 8/15 (53%), Positives = 9/15 (60%)

Query: 76 KCTTCYTCYERCPRD 90
          KC +C  C E CP D
Sbjct: 48 KCISCSACKESCPSD 62