Pairwise Alignments

Query, 293 a.a., CoB--CoM heterodisulfide reductase subunit B from Methanococcus maripaludis S2

Subject, 433 a.a., glycolate oxidase iron-sulfur subunit from Agrobacterium fabrum C58

 Score = 55.8 bits (133), Expect = 2e-12
 Identities = 66/287 (22%), Positives = 113/287 (39%), Gaps = 54/287 (18%)

Query: 2   KYAFFLGCIMPNRYAGVESATRTVMEKLGVELVDMPGASCCPAPGVFGSFDQKTWLTLAA 61
           + A   GC  P    G+  AT  ++ +LG+E+V   G  CC +  V     ++  L  A 
Sbjct: 188 RVALLTGCAQPVLDPGINEATLRLLARLGIEVVVPRGEGCCGSL-VHHMGREEEALASAR 246

Query: 62  RNLVI----AEEMGTD-IVTVCNGCYGSLYEAAHMLHEN---KEALAMVNEQLKEIGKEY 113
           RN+ +     EE G D I+   +GC  ++ +  HML  +    E  A V+   K+I  EY
Sbjct: 247 RNVDVWMREMEEGGLDAIIITASGCGTTIKDYGHMLRLDPAYAEKAARVSALAKDI-TEY 305

Query: 114 KGTVHVRHFAELIYKEIGVDKIRENVVKPLAVNIGVHYGC---HFLKPTAAKGLGNAEHP 170
             ++ +                     +   + +  H  C   H  K T A         
Sbjct: 306 LASLDLPQ------------------RQSQGLTVAYHSACSMQHGQKITLAP-------- 339

Query: 171 TMLDELVEATGAKSVDYKDKMMCCGAGGGVRAKELDLALSMTQEKIENMLAVGADATVNV 230
               +L++A G    D  +  +CCG+ G     + +++  +   K++N+ A  AD     
Sbjct: 340 ---KQLLKAAGFTVRDPAEGHLCCGSAGTYNILQPEISSKLKARKVKNIEATRADVIAT- 395

Query: 231 CPFCQLQFDRGQVEIKEKLGNEYNFPVVHLSQLLGLAMGMDPKEVAL 277
                     G +    ++G   + P++H  +LL  A G  PK   L
Sbjct: 396 ----------GNIGCITQIGTGTDMPILHTVELLDWAYG-GPKPARL 431