Pairwise Alignments

Query, 462 a.a., V-type ATP synthase subunit B from Methanococcus maripaludis S2

Subject, 452 a.a., ATP synthase from Pseudomonas simiae WCS417

 Score =  139 bits (350), Expect = 2e-37
 Identities = 105/333 (31%), Positives = 156/333 (46%), Gaps = 15/333 (4%)

Query: 32  GEIVDITTPNGDKRTGQVLEAREEIAVVQVFEGTSELNTSETKVRFTGDTAKIGVSYDML 91
           G++  +    GD    +++   ++ AV+    G  E       V   G   ++ VS  +L
Sbjct: 50  GDLCRVEKKPGDYMLAEIIGFDQQDAVLSAL-GNLEGVQVGAGVERLGVAHRVQVSEALL 108

Query: 92  GRIFNGAGKPLDG-GPEIIAEEKLDINGYPLN----PVSRNPPNAFVQTGVSTIDGTNTL 146
           G++ +G G+P+ G GP    E  L      L     P  R   N  + TGV +IDG  TL
Sbjct: 109 GQVLDGFGRPITGEGPGAFVEADLPDTSAVLCEAPLPTERPRINRALATGVRSIDGLLTL 168

Query: 147 VRGQKIPIFSGSGLPHNKLATQIARQAKVRGEGEQFAVVFAAMGITGEESNYFMDEFKKT 206
             GQ++ +F+G+G     L  +IAR            +VF  +G  G E   F+D     
Sbjct: 169 GEGQRVGLFAGAGCGKTTLLAEIARNVDCD------VIVFGLIGERGRELREFLDHELDE 222

Query: 207 GALEKAVVFINLADDPAIERILTPRIALTTAEYLAYEKGMHVLVILTDLTNYCEALREIA 266
               KAV+    +D  ++ER      A   AE     KG+ VL+++  LT +  A REI 
Sbjct: 223 QLRSKAVLVCATSDRSSMERARAAFTATALAEGYR-RKGLRVLLLIDSLTRFARAQREIG 281

Query: 267 AARNEVPGRRGYPGYMYTDLACLYERAGRVKGKEGTVTQIPILTMPDDDITHPIPDLTGY 326
            A  E  GR G P  +Y+ L  L ERAG  +   G +T I  + +  D +  P+ D    
Sbjct: 282 LAAGEPLGRGGLPPSVYSLLPRLVERAGLTRA--GVITAIYTVLIEQDSMNDPVADEVRS 339

Query: 327 ITEGQIVLSRELNRKGVYPPVDILPSLSRLAGN 359
           + +G IVLSR+L  +G YP VD+L SLSR+  N
Sbjct: 340 LLDGHIVLSRKLAERGHYPAVDVLASLSRILSN 372