Pairwise Alignments

Query, 462 a.a., V-type ATP synthase subunit B from Methanococcus maripaludis S2

Subject, 452 a.a., Flagellum-specific ATP synthase from Pseudomonas sp. DMC3

 Score =  155 bits (392), Expect = 3e-42
 Identities = 100/318 (31%), Positives = 164/318 (51%), Gaps = 15/318 (4%)

Query: 80  DTAKIGVSYDMLGRIFNGAGKPLDGGPEIIAEEKLDINGYPLNPVSRNPPNAFVQTGVST 139
           DT ++ +   MLGR+ +GAG+ LDG   + AE+ + ++G  +NP++R+P +  +  G+  
Sbjct: 99  DTGRLPMGMSMLGRVLDGAGRALDGKGGMKAEDWVPMDGPTINPLNRDPISVPLDVGIRC 158

Query: 140 IDGTNTLVRGQKIPIFSGSGLPHNKLATQIARQAKVRGEGEQFAVVFAAMGITGEESNYF 199
           I+G  T+ RGQ++ +F+G+G+  + L   + R        E   +V   +G  G E   F
Sbjct: 159 INGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFT------EADIIVVGLIGERGREVKEF 212

Query: 200 MDEFKKTGALEKAVVFINLADDPAIERILTPRIALTTAEYLAYEKGMHVLVILTDLTNYC 259
           ++       L+++VV  + ADD  + R+         AEY   +KG +VL+++  LT + 
Sbjct: 213 IEHILGEEGLKRSVVVASPADDAPLMRMRAAMYCTRIAEYFR-DKGKNVLLLMDSLTRFA 271

Query: 260 EALREIAAARNEVPGRRGYPGYMYTDLACLYERAGRVKGKEGTVTQIPILTMPDDDITHP 319
           +A REIA A  E P  +GYP  ++  L  L ERAG  +   G++T    +    DD   P
Sbjct: 272 QAQREIALAIGEPPATKGYPPSVFAKLPKLVERAGNAEKGGGSITAFYTVLSEGDDQQDP 331

Query: 320 IPDLTGYITEGQIVLSRELNRKGVYPPVDILPSLSRLAGNGQGEGKTRDDH---SKVISQ 376
           I D    + +G IVLSR L  +G YP +DI  S+SR+            DH   ++   Q
Sbjct: 332 IADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVM-----PAVVSPDHMQRAQYFKQ 386

Query: 377 AYAAYAEGRGLRDLVAVV 394
            ++ Y + R L  + A V
Sbjct: 387 LWSRYQQSRDLISVGAYV 404