Pairwise Alignments

Query, 462 a.a., V-type ATP synthase subunit B from Methanococcus maripaludis S2

Subject, 433 a.a., Type III secretion cytoplasmic ATP synthase (EC 3.6.3.14, YscN,SpaL,MxiB,HrcN,EscN) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  128 bits (321), Expect = 4e-34
 Identities = 84/276 (30%), Positives = 135/276 (48%), Gaps = 14/276 (5%)

Query: 83  KIGVSYDMLGRIFNGAGKPLDGG--PEIIAEEKLDINGYPLNPVSRNPPNAFVQTGVSTI 140
           ++ V   +LGR+ +G G+PLDG   P++  +   D +  P   + R P    + TG+  I
Sbjct: 90  QVPVGEALLGRVIDGFGRPLDGRELPDVCWK---DYDAMPPPAMVRQPITQPLMTGIRAI 146

Query: 141 DGTNTLVRGQKIPIFSGSGLPHNKLATQIARQAKVRGEGEQFAVVFAAMGITGEESNYFM 200
           D   T   GQ++ IFS  G+  + L   +               V   +G  G E   F+
Sbjct: 147 DSVATCGEGQRVGIFSAPGVGKSTLLAMLCNAPDADSN------VLVLIGERGREVREFI 200

Query: 201 DEFKKTGALEKAVVFINLADDPAIERILTPRIALTTAEYLAYEKGMHVLVILTDLTNYCE 260
           D        ++ V+ +  +D PA+ER+    +A T AE+   + G  V+++   LT Y  
Sbjct: 201 DFTLSEETRKRCVIVVATSDRPALERVRALFVATTIAEFFR-DNGKRVVLLADSLTRYAR 259

Query: 261 ALREIAAARNEVPGRRGYPGYMYTDLACLYERAGRVKGKEGTVTQIPILTMPDDDITHPI 320
           A REIA A  E      YP  +++ L  L ER G   G++G++T    + +  DD+  P+
Sbjct: 260 AAREIALAAGETAVSGEYPPGVFSALPRLLERTGM--GEKGSITAFYTVLVEGDDMNEPL 317

Query: 321 PDLTGYITEGQIVLSRELNRKGVYPPVDILPSLSRL 356
            D    + +G IVLSR L  +G YP +D+L +LSR+
Sbjct: 318 ADEVRSLLDGHIVLSRRLAERGHYPAIDVLATLSRV 353