Pairwise Alignments

Query, 462 a.a., V-type ATP synthase subunit B from Methanococcus maripaludis S2

Subject, 431 a.a., type III secretion system ATPase SctN from Erwinia amylovora T8

 Score =  136 bits (342), Expect = 2e-36
 Identities = 91/284 (32%), Positives = 142/284 (50%), Gaps = 14/284 (4%)

Query: 78  TGDTAKIGVSYDMLGRIFNGAGK---PLDGGPEIIAE--EKLDINGYPLNPVSRNPPNAF 132
           TG   ++ VS   LG I +  G     LDGGP       E L+  G P +   R P    
Sbjct: 78  TGKPFRVAVSERTLGAILDATGTIQGRLDGGPVAAPTGVENLETGGVPRDFTQRKPIAVP 137

Query: 133 VQTGVSTIDGTNTLVRGQKIPIFSGSGLPHNKLATQIARQAKVRGEGEQFAVVFAAMGIT 192
           + TGV  IDG  T  +GQ++ IF+ +G     L + I   +      E    V   +G  
Sbjct: 138 LATGVRAIDGLLTCGQGQRMGIFAATGCGKTSLMSMIIEHS------EADIYVIGLIGER 191

Query: 193 GEESNYFMDEFKKTGALEKAVVFINLADDPAIERILTPRIALTTAEYLAYEKGMHVLVIL 252
           G E   F++E +++    K V+    +D   +ER    ++A T AEY   E+G +VL+ +
Sbjct: 192 GREVTEFVEELRRSSRRSKVVLVYATSDRSCVERCNAAQVASTVAEYFC-EQGKNVLLFI 250

Query: 253 TDLTNYCEALREIAAARNEVPGRRGYPGYMYTDLACLYERAGRVKGKEGTVTQIPILTMP 312
             +T Y  ALR++A +  E+P RRGYP  ++  L  L ER GR     G+++    + + 
Sbjct: 251 DSVTRYARALRDVALSMGELPARRGYPASVFEALPKLLERPGRF--LTGSISAFYTVLIE 308

Query: 313 DDDITHPIPDLTGYITEGQIVLSRELNRKGVYPPVDILPSLSRL 356
           +++ +  I D    I +G I LS++L  KG YP +D+L S+SR+
Sbjct: 309 NEEESDVIGDEVRSILDGHIYLSKKLAAKGHYPAIDVLQSISRV 352