Pairwise Alignments

Query, 462 a.a., V-type ATP synthase subunit B from Methanococcus maripaludis S2

Subject, 444 a.a., Flagellum-specific ATP synthase from Alteromonas macleodii MIT1002

 Score =  164 bits (416), Expect = 4e-45
 Identities = 132/431 (30%), Positives = 204/431 (47%), Gaps = 25/431 (5%)

Query: 15  RIAGPLMVIDG--IEGIAYG-EIVDITTPNGDKRTGQVLEAREEIAVVQVFEGTSELNTS 71
           ++  P +V  G  + GI    E V    P G +   Q +E   E  VV   +  + L  +
Sbjct: 15  QVTSPPVVAAGKLVRGIGLTLEAVGCQLPVGSQCLVQTIEGEIEAEVVGFGDDITYLMPT 74

Query: 72  E--------TKVRFTGDTAKIGVSYDMLGRIFNGAGKPLDGGPEIIAEEKLDINGYPLNP 123
           E        ++V      + + V   +LGR+ +G G+PLDG  EI AE +      P+NP
Sbjct: 75  EAVRGIVPGSRVMPLNRQSGLPVGMGLLGRVVDGNGQPLDGLGEINAEARAPTTRPPMNP 134

Query: 124 VSRNPPNAFVQTGVSTIDGTNTLVRGQKIPIFSGSGLPHNKLATQIARQAKVRGEGEQFA 183
           + R P N  +  GV  I+  NT+  GQ++ +F+GSG+  + L   + R        E   
Sbjct: 135 LIRRPINTPMDVGVRAINALNTVGVGQRMGLFAGSGVGKSVLLGMMTRGC------EADV 188

Query: 184 VVFAAMGITGEESNYFMDEFKKTGALEKAVVFINLADDPAIERILTPRIALTTAEYLAYE 243
           VV   +G  G E   F+ E       ++AVV    AD   + R+     A+T AEY   +
Sbjct: 189 VVVGLVGERGREVKEFIHEILTEEERQRAVVVAAPADTSPLMRLKGCETAVTIAEYFR-D 247

Query: 244 KGMHVLVILTDLTNYCEALREIAAARNEVPGRRGYPGYMYTDLACLYERAGRVKGKEGTV 303
           KGM VL+++  LT Y  A REIA A  E P  +GYP  ++  L  L ERAG    ++G++
Sbjct: 248 KGMKVLLLIDSLTRYAMAQREIALAVGEPPATKGYPPSVFARLPALVERAGNGSERQGSI 307

Query: 304 TQIPILTMPDDDITHPIPDLTGYITEGQIVLSRELNRKGVYPPVDILPSLSRLAGNGQGE 363
           T    +    DD+  PI D    I +G +VLSR L   G YP +DI  S+SR+      E
Sbjct: 308 TAFYTVLTEGDDLQDPIADAARAILDGHVVLSRTLADSGHYPAIDIEASISRVMPMVVSE 367

Query: 364 GKTRDDHSKVISQAYAAYAEGRGLRDLVAVVGEEALTERDRSFLKF-ADAFENSIVTQGV 422
                +H  +  +    Y+  +  +DL++ +G  A     R  L   A+   N+++ QGV
Sbjct: 368 -----EHQLMARRIRQVYSNYKQNQDLIS-IGAYAKGSDPRIDLAIRAEPAINALLQQGV 421

Query: 423 DEDRSIEETLD 433
            +    +E+L+
Sbjct: 422 KQVIPYDESLE 432