Pairwise Alignments

Query, 462 a.a., V-type ATP synthase subunit B from Methanococcus maripaludis S2

Subject, 473 a.a., flagellum-specific ATP synthase from Agrobacterium fabrum C58

 Score =  144 bits (363), Expect = 6e-39
 Identities = 117/394 (29%), Positives = 186/394 (47%), Gaps = 20/394 (5%)

Query: 13  VSRIAGPLMVIDGIEG-IAYGEIVDITTPNGDKRTGQVLEAREEIAVVQVFEGTSELNTS 71
           V  IA     + G+   +  GE V   +  G    G+V+    +I  V   E    +   
Sbjct: 45  VRTIAAGHYTVSGLSRHVRLGEFVAHRSATGI-HLGEVVRVEPDICYVCPIEPGEPIGIH 103

Query: 72  ETKVRFTGDTAKIGVSYDMLGRIFNGAGKPLDG-GPEIIAEEKLDINGYPLNPVSRNPPN 130
           +T +R      ++       GR  N  G+P+DG GP      +  I+      ++R    
Sbjct: 104 DTVIR--KGAFRVSPDESWCGRTINALGEPIDGQGPLASGIVRRSISNNAPPSMTRKRVE 161

Query: 131 AFVQTGVSTIDGTNTLVRGQKIPIFSGSGLPHNKLATQIARQAKVRGEGEQF-AVVFAAM 189
              +TGV  ID  + L  GQ++ IF+GSG+  + L + +A+        + F  VV A +
Sbjct: 162 TPFKTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLLSMLAK-------ADAFDKVVIALV 214

Query: 190 GITGEESNYFMDEFKKTGALEKAVVFINLADDPAIERILTPRIALTTAEYLAYEKGMHVL 249
           G  G E   F+++      + K+V  +  +D+  + R + P  A+T AE+   ++G +VL
Sbjct: 215 GERGREVREFIEDTMGDN-MSKSVAVVATSDESPMLRKMAPLSAVTIAEHFR-DQGDNVL 272

Query: 250 VILTDLTNYCEALREIAAARNEVPGRRGYPGYMYTDLACLYERAGRVKGKEGTVTQIPIL 309
           +I+  +T +  A+RE+A A  E P  RGYP  ++T+L  L ERAG      GT+T I  +
Sbjct: 273 LIIDSVTRFAHAIREVAVASGEPPVARGYPASVFTELPRLLERAGPGAEGTGTITAIVSI 332

Query: 310 TMPDDDITHPIPDLTGYITEGQIVLSRELNRKGVYPPVDILPSLSRLAGNGQGEGKTRDD 369
            +  D+   PI D T  I +G IVL R L  +G YPP++ L S+SRLA     +     D
Sbjct: 333 LVDGDNHNDPIADSTRGILDGHIVLDRSLAEEGRYPPINPLASISRLA-----KKAWTPD 387

Query: 370 HSKVISQAYAAYAEGRGLRDLVAVVGEEALTERD 403
             K++S+  A        RDL  + G    T+ D
Sbjct: 388 QEKLVSRLKALVHRFEETRDLRLIGGYRPGTDPD 421