Pairwise Alignments

Query, 586 a.a., ATP synthase subunit A from Methanococcus maripaludis S2

Subject, 458 a.a., ATP synthase F0F1 subunit beta from Pseudomonas simiae WCS417

 Score =  122 bits (305), Expect = 4e-32
 Identities = 114/417 (27%), Positives = 187/417 (44%), Gaps = 29/417 (6%)

Query: 93  EIENATDSIYIPRGVSVPSISREIKWDFEPTAAAGDEVITGDVIGTVQETASIVHKIMIP 152
           +I  A   +  PR  SVPSI   +K     T     + +   V+ T+   ++   K  + 
Sbjct: 8   QIIGAVIDVEFPRD-SVPSIYNALKVQGADTTLEVQQQLGDGVVRTIAMGSTEGLKRGLD 66

Query: 153 FGVSGKIKEIKAGSFTVEETVAVVETAEGEK-EIMMMQKWPVRKPRPSKGKQAPVIPLI- 210
              SG    +  G  T+   + V+     E   I   ++W + +P PS  +QA    L+ 
Sbjct: 67  VVDSGAAISVPVGKATLGRIMDVLGNPIDEAGPIDTEERWGIHRPAPSFAEQAGGNDLLE 126

Query: 211 TGQRVEDTFFGLAKGGASAIPGPFGSGKTVTQHQLAKWSDVD---VVVYIGCGERGNEMT 267
           TG +V D     AKGG   + G  G GKTV   +L +   ++     V+ G GER  E  
Sbjct: 127 TGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGN 186

Query: 268 EVIEEFPHLDDIKTGNKLMDRTVLIANTSNMPVAAREASVYTGITIAEYFRDQGLGVLLT 327
           +   E      +K  N ++D+  L+    N P   R     TG+T+AE FRD+G  VLL 
Sbjct: 187 DFYHE------MKDSN-VLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLF 239

Query: 328 ADSTSRWAEAMREISGRLEEMPGEEGYPAYLSSKLAQFYERAGRVECLGSENKQGFVCIV 387
            D+  R+  A  E+S  L  MP   GY   L+ ++    ER        +  K+G +  +
Sbjct: 240 VDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI-------TSTKEGSITSI 292

Query: 388 GAVSPPGGDFSEPVTSNTLRIVKVFWALDANLARRRHFPAINWLTSYSLYID-DIAGWWQ 446
            AV  P  D ++P  + T   +     L  ++A    +PA++ L S S  +D ++ G   
Sbjct: 293 QAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGQEH 352

Query: 447 QNTAADWRSLRDEAMSLLQKEAELQEIVQLVGPDALPDRERVILEIARMLREDFLQQ 503
            +TA            +LQ+  EL++I+ ++G D L + ++ ++  AR ++  FL Q
Sbjct: 353 YDTARG-------VQYVLQRYKELKDIIAILGMDELSEADKQLVNRARKIQR-FLSQ 401



 Score = 41.2 bits (95), Expect = 9e-08
 Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 23/180 (12%)

Query: 1   MVVGKIIKISGPVVVAEGMKGS--QMFEVVKVGNEGLTGEIIQLTEDEAIIQV-YEETAG 57
           M  G+I++I G V+  E  + S   ++  +KV     T E+ Q   D  +  +    T G
Sbjct: 1   MSSGRIVQIIGAVIDVEFPRDSVPSIYNALKVQGADTTLEVQQQLGDGVVRTIAMGSTEG 60

Query: 58  IKPGEGVEGTGAPLSVELGPGMLKAMYDGIQRPLNEIENATDSIYIPRGVSVPSISREIK 117
           +K G  V  +GA +SV +G   L  + D +  P++E                  I  E +
Sbjct: 61  LKRGLDVVDSGAAISVPVGKATLGRIMDVLGNPIDE---------------AGPIDTEER 105

Query: 118 WDFEPTAAAGDEVITGDVIGTVQETASIVHKIMIPFGVSGKIKEIKAGSFTVEETVAVVE 177
           W     A +  E   G+    + ET   V  ++ PF   GK+     G   V +TV ++E
Sbjct: 106 WGIHRPAPSFAEQAGGN---DLLETGIKVIDLVCPFAKGGKVGLF--GGAGVGKTVNMME 160