Pairwise Alignments

Query, 159 a.a., 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH from Methanococcus maripaludis S2

Subject, 155 a.a., 50S rRNA methyltransferase from Pseudomonas simiae WCS417

 Score = 92.8 bits (229), Expect = 2e-24
 Identities = 46/159 (28%), Positives = 95/159 (59%), Gaps = 4/159 (2%)

Query: 1   MNVTIISVGKIKEKYLSDAIIEYSKRISRYSKLDIIEVADEKTPENPSDVEKSKILEKEA 60
           M + +I+VG    K++ +   EY+KR+     L+++E+      +N    + ++ + +E 
Sbjct: 1   MRLRLIAVGSRMPKWVEEGWHEYAKRLPAELSLELVEIPLNTRGKN---ADVARFIRQEG 57

Query: 61  ERILKYLKKDSFLITLEILGKELTSEDLAKKINDLSISGKSDITFVIGGSLGLSKNISEI 120
           E +L  +  +  ++TLE+ GK  ++E LA +++   +  ++ + F++GG  GL+  +   
Sbjct: 58  EAMLAKVGPNERIVTLEVHGKPWSTEQLAVELDRWRLDSRT-VNFMVGGPEGLAPEVCAR 116

Query: 121 SDFKLSFSKMTFPHQLMRVILLEQIYRSFRIISGEPYHK 159
           +D + S S +T PH L+R+++ EQ+YR++ ++SG PYHK
Sbjct: 117 ADQRWSLSALTLPHPLVRILIGEQLYRAWTVLSGHPYHK 155