Pairwise Alignments

Query, 159 a.a., 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH from Methanococcus maripaludis S2

Subject, 155 a.a., Protein of unknown function DUF163 from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score = 89.7 bits (221), Expect = 2e-23
 Identities = 45/159 (28%), Positives = 94/159 (59%), Gaps = 4/159 (2%)

Query: 1   MNVTIISVGKIKEKYLSDAIIEYSKRISRYSKLDIIEVADEKTPENPSDVEKSKILEKEA 60
           M + +I+VG    K++ +   EY+KR+     L+++E+      +N    + ++ + +E 
Sbjct: 1   MRLRLIAVGSRMPKWVEEGWHEYAKRMPSELALELVEIPLNTRGKN---ADVARFIRQEG 57

Query: 61  ERILKYLKKDSFLITLEILGKELTSEDLAKKINDLSISGKSDITFVIGGSLGLSKNISEI 120
           E +L  ++    ++TLE+ GK  ++E LA +++   +  ++ +  ++GG  GL+  +   
Sbjct: 58  EAMLAKVQPGERIVTLEVQGKPWSTEQLAVELDRWRLDART-VNLMVGGPEGLAPEVCAR 116

Query: 121 SDFKLSFSKMTFPHQLMRVILLEQIYRSFRIISGEPYHK 159
           S+ + S S +T PH L+R+++ EQ+YR++ ++SG PYHK
Sbjct: 117 SEQRWSLSPLTLPHPLVRILIGEQMYRAWTVLSGHPYHK 155