Pairwise Alignments

Query, 159 a.a., 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH from Methanococcus maripaludis S2

Subject, 156 a.a., rRNA large subunit m3Psi methyltransferase RlmH from Kangiella aquimarina DSM 16071

 Score = 93.6 bits (231), Expect = 1e-24
 Identities = 49/159 (30%), Positives = 91/159 (57%), Gaps = 4/159 (2%)

Query: 1   MNVTIISVGKIKEKYLSDAIIEYSKRISRYSKLDIIEVADEKTPENPSDVEKSKILEKEA 60
           M V +++VG+    ++     EY+KR     KL+++EVA EK  +N    + S+I EKE 
Sbjct: 1   MQVRLLTVGQKMPAWVEQGFQEYAKRFPNDFKLELVEVAAEKRGKN---ADISRITEKEG 57

Query: 61  ERILKYLKKDSFLITLEILGKELTSEDLAKKINDLSISGKSDITFVIGGSLGLSKNISEI 120
           + +L  ++   +++ L++ GK  ++  LA++I         ++  ++GG  GLS+     
Sbjct: 58  KALLSQIQSSDWVVALDVKGKTFSTSQLAQQIEHWQ-QHYPNLVLLVGGPEGLSEECLAR 116

Query: 121 SDFKLSFSKMTFPHQLMRVILLEQIYRSFRIISGEPYHK 159
           ++ K S S +TFPH L+R+I+ E +YR++ +    PYH+
Sbjct: 117 ANQKWSLSALTFPHPLVRIIVAESLYRAWSVTVNHPYHR 155