Pairwise Alignments

Query, 159 a.a., 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH from Methanococcus maripaludis S2

Subject, 155 a.a., 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH from Escherichia coli ECRC100

 Score = 81.3 bits (199), Expect = 7e-21
 Identities = 47/159 (29%), Positives = 90/159 (56%), Gaps = 5/159 (3%)

Query: 1   MNVTIISVGKIKEKYLSDAIIEYSKRISRYSKLDIIEVADEKTPENPSDVEKSKILEKEA 60
           + + +++VG     ++     EY +R  +    ++IE+   K  +N +D+++  IL+KE 
Sbjct: 1   VKLQLVAVGTKMPDWVQTGFTEYLRRFPKDMPFELIEIPAGKRGKN-ADIKR--ILDKEG 57

Query: 61  ERILKYLKKDSFLITLEILGKELTSEDLAKKINDLSISGKSDITFVIGGSLGLSKNISEI 120
           E++L    K+  ++TL+I GK   +  LA ++    + G+ D++ +IGG  GLS      
Sbjct: 58  EQMLAAAGKNR-IVTLDIPGKPWDTPQLAAELERWKLDGR-DVSLLIGGPEGLSPACKAA 115

Query: 121 SDFKLSFSKMTFPHQLMRVILLEQIYRSFRIISGEPYHK 159
           ++   S S +T PH L+RV++ E +YR++ I +  PYH+
Sbjct: 116 AEQSWSLSALTLPHPLVRVLVAESLYRAWSITTNHPYHR 154