Pairwise Alignments

Query, 159 a.a., 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH from Methanococcus maripaludis S2

Subject, 160 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score = 90.5 bits (223), Expect = 1e-23
 Identities = 53/165 (32%), Positives = 89/165 (53%), Gaps = 12/165 (7%)

Query: 1   MNVTIISVGKIKEKYLSDAIIEYSKRISRYSKL------DIIEVADEKTPENPSDVEKSK 54
           M ++I +VG++K     D    Y +R+++           +IEV + +     S+ E  K
Sbjct: 1   MRISIFAVGRLKSGPEKDLAARYIERLAKTGPAIGLEFSRVIEVGESRA----SNAETRK 56

Query: 55  ILEKEAERILKYLKKDSFLITLEILGKELTSEDLAKKINDLSISGKSDITFVIGGSLGLS 114
              +EA  + K+L   + L+ L+  GK L S   A    DL  SGK D+   IGG+ GL 
Sbjct: 57  --REEAAMLEKHLADGAVLVLLDERGKALDSPAFASLFGDLRDSGKRDLVIAIGGADGLD 114

Query: 115 KNISEISDFKLSFSKMTFPHQLMRVILLEQIYRSFRIISGEPYHK 159
             + + +   L+  K+T+PHQ++R+++ EQ+YR+  I+SG PYH+
Sbjct: 115 SALYDKATAVLNLGKLTWPHQIVRILIAEQLYRAVTILSGHPYHR 159