Pairwise Alignments

Query, 268 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 330 a.a., Protein QmcA from Xanthobacter sp. DMC5

 Score =  177 bits (450), Expect = 2e-49
 Identities = 98/239 (41%), Positives = 153/239 (64%), Gaps = 8/239 (3%)

Query: 11  IFLLVLIIKSVIIV-------NQFELGLIFRLGKVRGRLNPGVNFIIPFID-VPIKVDVR 62
           +F+LVL++ +V +V        Q     + R  +    L PG+N I+PFID +  +V+V 
Sbjct: 8   LFVLVLLVLAVAVVFSGVKTVPQGYQYTVERFRRYTKTLMPGLNLIVPFIDRIGNRVNVM 67

Query: 63  TKVIDVPPQEMITRDNAGVRIDAVIYYRVMDVNRAILEVQNFQYAIINLAQTSLRAIIGS 122
            +VIDVP QE+IT+DNA V +D V++++V D  RA  EV     AI+ L  T++R ++GS
Sbjct: 68  EQVIDVPSQEVITKDNATVTVDGVVFFQVFDAARASYEVARLDAAILALTMTNIRTVMGS 127

Query: 123 LELDDALNKREFINSQLLETLDRDTDAWGVKVEKVELREIEPPTDIKNAMTQQMKAERLK 182
           ++LD  L+ R+ IN +LL  +D     WG+K+ ++E+++I PP D+ NAM +QMKAER K
Sbjct: 128 MDLDQLLSHRDEINVRLLTVVDAACSPWGIKMTRIEIKDIVPPADLVNAMGRQMKAEREK 187

Query: 183 RAAILEAEGEKQSKILKAQGTAESMKIEAEGQAKAIQIVAESAQNYFKNEAQLYKALDV 241
           RA ILEAEG +QS+ILKA+G  +   ++AEG+ +A    AE+ +   + +A+  + L V
Sbjct: 188 RAVILEAEGLRQSEILKAEGQKQGQILQAEGRREAAFRDAEARERLAQADAKATEMLSV 246