Pairwise Alignments

Query, 268 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 306 a.a., protease from Pseudomonas simiae WCS417

 Score =  189 bits (480), Expect = 6e-53
 Identities = 101/262 (38%), Positives = 169/262 (64%), Gaps = 4/262 (1%)

Query: 5   LNLLLGIFLLVLIIKSVIIVNQFELGLIFRLGKVRGRLNPGVNFIIPFID-VPIKVDVRT 63
           L L +G+ + +L +   ++   ++   + R G+    L PG+N IIP +D +  K++V  
Sbjct: 7   LLLFVGLAIAILFMGFKVVPQGYQW-TVERFGRYTNTLKPGLNIIIPVMDRIGRKINVME 65

Query: 64  KVIDVPPQEMITRDNAGVRIDAVIYYRVMDVNRAILEVQNFQYAIINLAQTSLRAIIGSL 123
            V+D+PPQE+IT DNA V+IDAV +++V++  +A  EV N ++AI NL QT++R ++GS+
Sbjct: 66  SVLDIPPQEVITADNATVQIDAVCFFQVVNTAQAAYEVNNLEHAIRNLLQTNIRTVLGSM 125

Query: 124 ELDDALNKREFINSQLLETLDRDTDAWGVKVEKVELREIEPPTDIKNAMTQQMKAERLKR 183
           ELD  L++R+ IN +LL+T+D  T  WG+K+ ++E+++I PP D+  AM+ QMKAER+KR
Sbjct: 126 ELDAMLSQRDGINEKLLKTVDEATAPWGIKITRIEIKDISPPADLMAAMSGQMKAERIKR 185

Query: 184 AAILEAEGEKQSKILKAQGTAESMKIEAEGQAKAIQIVAESAQNYFKNEAQLYKALD--V 241
           A ILEAEG + S IL A+G  ++  +EAEG  +A  + +E+ +   + EA+  + +   +
Sbjct: 186 AQILEAEGLRASAILTAEGKKQAQILEAEGSRQAAFLESEARERQAEAEARATQVVSEAI 245

Query: 242 TSNTLKDNTKFVISENIMDVAK 263
            S  ++    FV  + I  + K
Sbjct: 246 ASGNVQAVNYFVAQKYIDALGK 267