Pairwise Alignments

Query, 268 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 281 a.a., Protein QmcA from Methylophilus sp. DMC18

 Score =  164 bits (414), Expect = 3e-45
 Identities = 90/230 (39%), Positives = 151/230 (65%), Gaps = 8/230 (3%)

Query: 5   LNLLLGIFLLVLIIKSVIIVNQFELGLIFRLGKVRGRLNPGVNFIIP-FIDVPIKVDVRT 63
           +++++ + +++ I+K V IV Q E  ++ RLGK  G L PG+N I P F +V  KV  + 
Sbjct: 4   VSVIVIVLVVIAIVKGVRIVPQGEEWVVERLGKFAGILKPGLNVINPVFSNVSYKVTTKD 63

Query: 64  KVIDVPPQEMITRDNAGVRIDAVIYYRVMDVNRAILEVQNFQYAIINLAQTSLRAIIGSL 123
            ++DVP QE+ITRDNA +  +AV + +V ++ RA+  ++NF+ A+ N+ QTSLR+IIG +
Sbjct: 64  IILDVPEQEVITRDNAVILANAVAFIKVTNIERAVYGIENFREAMRNMVQTSLRSIIGGM 123

Query: 124 ELDDALNKREFINSQLLETLDRDTDAWGVKVEKVELREIEPPTDIKNAMTQQMKAERLKR 183
           +L+ AL  R+ I ++L E +  +   WG+ V+ VE+++I+P  ++++AM +Q  AER + 
Sbjct: 124 DLNHALTSRDRIKAELKEAIADEALDWGLTVKSVEIQDIKPSANMQDAMERQAAAERERV 183

Query: 184 AAILEAEGEKQSKILKAQGTAESMKIEAEGQ-------AKAIQIVAESAQ 226
           A + EAEG KQS IL A+   E+ + +AE Q       A AI+++AE+ +
Sbjct: 184 AVVTEAEGAKQSLILNAEARLEAARKDAEAQMVGAQASAAAIKMIAEAVK 233