Pairwise Alignments

Query, 268 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 247 a.a., Membrane protease subunits, stomatin/prohibitin homologs from Kangiella aquimarina DSM 16071

 Score =  159 bits (402), Expect = 5e-44
 Identities = 88/257 (34%), Positives = 154/257 (59%), Gaps = 22/257 (8%)

Query: 13  LLVLIIKSVI-IVNQFELGLIFRLGKVRGRLNPGVNFIIPFIDVPIKVDVRTKVIDVPPQ 71
           L++L + S+  I+ ++E G+IF LG+      PG+  +IPF+   ++VD+R  V+DVP Q
Sbjct: 11  LIILTVASMFKILREYERGVIFMLGRFWKVKGPGLIILIPFVQQIVRVDLRIIVMDVPTQ 70

Query: 72  EMITRDNAGVRIDAVIYYRVMDVNRAILEVQNFQYAIINLAQTSLRAIIGSLELDDALNK 131
           ++I+RDN  V+++AV+Y+RV+D  +AI+ V+++  A   LAQT+LR+++G  ELD+ L  
Sbjct: 71  DVISRDNVSVKVNAVVYFRVVDPQKAIINVEHYFDATSQLAQTTLRSVLGQHELDEMLAS 130

Query: 132 REFINSQLLETLDRDTDAWGVKVEKVELREIEPPTDIKNAMTQQMKAERLKRAAILEAEG 191
           RE +N  + E LD  TDAWG+KV  VE++ ++    +  A+ QQ +AER +RA ++ A+G
Sbjct: 131 REKLNEDIQEILDSQTDAWGIKVSNVEIKHVDLDESMIRAIAQQAEAERRRRAKVIHAQG 190

Query: 192 EKQSKILKAQGTAESMKIEAEGQAKAIQIVAESAQNYFKNEAQLYKALDVTSNTLKDNTK 251
           E ++          S K+      +A Q++ +      K EA   + L   +    +N+ 
Sbjct: 191 EMEA----------SQKL-----FEAAQVLGQ------KEEALQLRYLQTLTEIAGENSN 229

Query: 252 FVISENIMDVAKKFIKQ 268
            ++    +D+ KKF+ +
Sbjct: 230 TIVFPLPIDLMKKFMSK 246