Pairwise Alignments

Query, 268 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 293 a.a., Modulator of FtsH protease HflC from Alteromonas macleodii MIT1002

 Score = 90.5 bits (223), Expect = 4e-23
 Identities = 67/260 (25%), Positives = 130/260 (50%), Gaps = 30/260 (11%)

Query: 6   NLLLGIFLLVLIIKS--VIIVNQFELGLIFRLGKVRGR--------LNPGVNFIIPFIDV 55
           NLL+  F+L++++ S  +  V + E  ++ + GKV+            PG++F +PFID 
Sbjct: 3   NLLIAAFVLLVLLASGSLFAVKEGERAIVIQFGKVQRDDATGETRVFEPGLHFKLPFIDS 62

Query: 56  PIKVDVRTKVIDVPPQEMITRDNAGVRIDAVIYYRVMDVNRAILEVQNFQYAIINLAQ-- 113
              +D R + +D  P   +T +   + +D+ + +R+ D  R  L     +     L +  
Sbjct: 63  VRHLDARIQTLDGTPDRFVTSEKKDLIVDSYVKWRIEDFARYYLSTGGNKLQAEALLRQK 122

Query: 114 --TSLRAIIGSLELDDALN-KREFINSQLLETLDRDTDAWGVKVEKVELREIEPPTDIKN 170
               LR+  G+  +   ++ +R  + +Q +E     +D  G+++  V +++I  PT++ N
Sbjct: 123 VNNGLRSEFGTRTIAQIVSGERSALMNQAMEQASTSSDELGIEIVDVRVKQINLPTEVSN 182

Query: 171 AMTQQMKAERLKRAAILEAEGEKQSKILKAQGTAE-----------SMKIEAEGQAKAIQ 219
           ++ Q+M+AER   A    +EG++Q++++KA   A+           + ++  EG A A Q
Sbjct: 183 SIFQRMRAERAAVAREHRSEGQEQAEVIKANIDAKVTVMLADAERNARQLRGEGDAIAAQ 242

Query: 220 IVAESAQNYFKNEAQLYKAL 239
           I A++   Y KN A  Y  L
Sbjct: 243 IYADA---YSKN-ADFYSFL 258