Pairwise Alignments

Query, 200 a.a., TetR/AcrR family transcriptional regulator from Methanococcus maripaludis S2

Subject, 220 a.a., DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

 Score = 54.3 bits (129), Expect = 2e-12
 Identities = 43/171 (25%), Positives = 83/171 (48%), Gaps = 18/171 (10%)

Query: 1   MSTKEKIVQNAAKLFLTKGYKQTSLNEIAEKTGITKGGIYHHFKDKNELFVEMAEYFKSK 60
           + T++++++ A   F   G  +T+LN+IA+   +T+G IY HF++K +LF EM  + +  
Sbjct: 10  LKTRQELIETAIAQFAQHGVSKTTLNDIADAANVTRGAIYWHFENKTQLFNEM--WLQQP 67

Query: 61  FASLLTKMEQESSLE-DLLKNYFENSEIVMQEIAEY--LELTLKDIKHFSEFQSRFTLDA 117
               L +    + LE D  +   E   + +Q IA+    +  LK + H  EF      + 
Sbjct: 68  SLRELIQEHLTAGLEHDPFQQLREKLIVGLQYIAKIPRQQALLKILYHKCEFNDEMLAEG 127

Query: 118 IQYGPEDMDFTMHTKSMYSLLKKKIELAKKNGEILEDIDTKEISLEIIAII 168
           +    E M F   T      L++ ++  ++ G +  ++D     L+++ II
Sbjct: 128 VI--REKMGFNPQT------LREVLQACQQQGCVANNLD-----LDVVMII 165