Pairwise Alignments

Query, 388 a.a., MMPL family transporter from Methanococcus maripaludis S2

Subject, 794 a.a., efflux RND transporter permease subunit from Rhodanobacter sp000427505 FW510-R12

 Score = 73.2 bits (178), Expect = 3e-17
 Identities = 70/361 (19%), Positives = 150/361 (41%), Gaps = 14/361 (3%)

Query: 16  RHPLKVVAVVIVLTIFMAFLATGIESQTDYEKMVPQDDPVIVALNEIRDEFGGTETIMLG 75
           RH +KV  V+ ++T F A   T ++ Q+ +  M+PQ+ P +    + +D F     + + 
Sbjct: 17  RHRVKVCIVIALITTFFAASLTRLDIQSRFGDMIPQNHPYVKIYEKYQDTFAAANRVTVL 76

Query: 76  VKLVPSDSSEKVTDIRDPRVLDLVDFLEQDIGSMDMITSVSSRADILKAYNNDV------ 129
           V+ V  +           R+ D +  +   +    + +  SS+   ++A +  +      
Sbjct: 77  VRAVDGNIFTLPVLGEIKRITDEMQTV-TGVNQSQITSLASSKLKRIEASSEGIETRTLM 135

Query: 130 ---IPNDVATVKTIYQNLPESSR-DGIF-NNDYSMVVVYATTDAGTDDKKILVKDINSRL 184
              +P + A + T+ Q + +S    G++ + D    ++         D K +   +   L
Sbjct: 136 WPNLPKNQAEIDTLRQAVLDSPMVYGLYVDRDLGSALIQVDFYDHLVDYKKIFPQVQKIL 195

Query: 185 DEAPIPPGVEVITTGTPALSELLKRMMDESQAVTGLASLLAIFTILLLYFRNIVKSVLPL 244
           D +PI   V +   G P L   +   + E+ ++  L SL+A+  +L +  R    ++LPL
Sbjct: 196 DSSPIKDQVSLHVVGEPILYGWVAHYLGETVSI-ALLSLVAMLVLLFMITRTWRGTLLPL 254

Query: 245 IPVVVAVIWAAGSMAIFKIPMDTATSVMGSLLLGLGIDYGVHLFHRYEE-ELGDGKSMDE 303
           I  +V+  WA G  ++     D    V+  ++      + V L  R+++  +G G     
Sbjct: 255 IAGLVSATWALGIGSLLGYNFDPLVIVVAFIITARAFSHSVQLITRFDDLTVGRGVEPRA 314

Query: 304 AINIAVVSTGSAVLVTTATTMAGFAALTIAPLSMMANMGKVCTLGIFFCMAAVICLLPPL 363
           A   ++       ++           + I P+ +M  +  V ++ +     + + L P L
Sbjct: 315 AAQESMRELFRPGMLGLWADAGAVLCVIITPIPLMHKVAIVGSIWVMTITVSAVVLTPVL 374

Query: 364 I 364
           +
Sbjct: 375 L 375



 Score = 53.9 bits (128), Expect = 2e-11
 Identities = 46/189 (24%), Positives = 88/189 (46%), Gaps = 10/189 (5%)

Query: 184 LDEAPIPPGVEVITTGT----PALSELLKRMMDESQAVTGLASLLAIFTILLLYFRNIVK 239
           +DE P+      +  G      A++E++ R  D+ +A+  LA L+ +   L+ Y R  V 
Sbjct: 586 IDENPLAHATARLAGGVLGNIAAVNEIVLR--DQVKAIA-LAFLVVVLCCLVAY-RTSVS 641

Query: 240 SVLPLIPVVVAVIWAAGSMAIFKIPMDTATSVMGSLLLGLGIDYGVHLFHRYEEELGDG- 298
            V  ++PV+++ +     MA   I M  +T  + +L +GLG+DY  ++    +E L +  
Sbjct: 642 GVFFIVPVLISNVVTFAFMAWHGIGMSISTLPVVALGIGLGVDYAFYIVDGIKEHLENNP 701

Query: 299 -KSMDEAINIAVVSTGSAVLVTTATTMAGFAALTIAPLSMMANMGKVCTLGIFFCMAAVI 357
             + +EA+   + S G  V +T     AG      + L   A MG +  + +       +
Sbjct: 702 QATPEEAVRQTLGSAGRGVALTALVLAAGVLLWAWSSLRFQAEMGILIGIWLMTSAFTAL 761

Query: 358 CLLPPLIVI 366
            ++P L ++
Sbjct: 762 YVMPSLALV 770