Pairwise Alignments

Query, 388 a.a., MMPL family transporter from Methanococcus maripaludis S2

Subject, 799 a.a., adhesin-associated MmpL efflux pump (from data) from Pseudomonas putida KT2440

 Score = 76.3 bits (186), Expect = 3e-18
 Identities = 56/268 (20%), Positives = 116/268 (43%), Gaps = 1/268 (0%)

Query: 97  DLVDFLEQDIGSMDMITSVSSRADILKAYNNDVIPNDVATVKTIYQNLPESSRDGIFNND 156
           +L+  +E   G    I+ V+    ++K  N   +  +  +      N   +  DG++N D
Sbjct: 511 ELMWTMENTPGVQSAISLVTVSKQVIKGMNEGSLKWETLSRNPDILNNSIARADGLYNGD 570

Query: 157 YSMVVVYATTDAGTDDKKILVKDINSRLDEAPIPPGVE-VITTGTPALSELLKRMMDESQ 215
            S+  V    +    +    V  +     ++    G++ ++  G   +      ++  ++
Sbjct: 571 CSLAPVLVFLNDHKAETLERVTAVAKAFADSHDKEGLQFLLAAGNAGIEAATNEVIKSAE 630

Query: 216 AVTGLASLLAIFTILLLYFRNIVKSVLPLIPVVVAVIWAAGSMAIFKIPMDTATSVMGSL 275
               +   + +  + L+ FR+   ++  ++P+V+  +     MA   I +  AT  + +L
Sbjct: 631 LTILILVYICVAVMCLITFRSFAATLCIVLPLVLTSVLGNALMAYMGIGVKVATLPVVAL 690

Query: 276 LLGLGIDYGVHLFHRYEEELGDGKSMDEAINIAVVSTGSAVLVTTATTMAGFAALTIAPL 335
            +G+G+DYG++++ R E  L  G  + EA    + STG AVL T      G      + +
Sbjct: 691 GVGIGVDYGIYIYSRLESFLRAGLPLQEAYYQTLRSTGKAVLFTGLCLAIGVCTWIFSAI 750

Query: 336 SMMANMGKVCTLGIFFCMAAVICLLPPL 363
              A+MG + T  + + M   + LLP L
Sbjct: 751 KFQADMGLMLTFMLLWNMFGALWLLPAL 778



 Score = 63.2 bits (152), Expect = 3e-14
 Identities = 79/369 (21%), Positives = 158/369 (42%), Gaps = 28/369 (7%)

Query: 21  VVAVVIVLTIFMAFLATGIESQTDYEKMVPQDDPVIVALNEIRDEFGGT-ETIMLGVKLV 79
           V+A+ ++++IF+ + AT I   T +EKM+P   P I  + E R++      T+ + V+ V
Sbjct: 31  VIALCVLVSIFLFWQATQIRPSTSFEKMIPLQHPFIEQMMEHRNDLANLGNTVRISVEAV 90

Query: 80  PSDSSEKVTDIRDPRVLDLVDFLE-QDIGSMDMITSVSSR-ADILKA--YNNDVIPN--- 132
             D  +K       ++ D V ++   D   +  + S S R +++ +      +VIPN   
Sbjct: 91  NGDIFDKDYMETLRQIHDEVFYIPGVDRAGLKSLWSPSVRWSEVTEEGFSGGEVIPNTYN 150

Query: 133 -DVATVKTIYQNLPESSRDG--IFNNDYSMVVVYATTDAGTDDK------KILVKDINSR 183
               ++ T+  N+ +S + G  + NN  S +V     ++  D +      K+  +  +  
Sbjct: 151 GSQDSLDTLRDNVLKSGQVGRLVGNNFKSSIVDVPLLESYPDPQDPGKQVKLDYQQFSHL 210

Query: 184 LDE------APIPPGVEVITTGTPALSELLKRMMDESQAVTGLASLLAIFTILLLYFRN- 236
           L+E          P V++   G    ++ +  ++D    V     +  + T++LLY+   
Sbjct: 211 LEEKIRDKFQAQNPNVKIHIVG---FAKKVGDLIDGLVMVAMFFGVALVITLVLLYWFTW 267

Query: 237 -IVKSVLPLIPVVVAVIWAAGSMAIFKIPMDTATSVMGSLLLGLGIDYGVHLFHRYEEEL 295
            I  +V  LI  +VAV+W  G M      +D  + ++  L+  +GI +GV   +    + 
Sbjct: 268 CIRSTVAVLITTLVAVVWQLGLMHAVGFGLDPYSMLVPFLIFAIGISHGVQKINGIALQS 327

Query: 296 GDGKSMDEAINIAVVSTGSAVLVTTATTMAGFAALTIAPLSMMANMGKVCTLGIFFCMAA 355
            D  +   A            ++       GF  L I  + ++  +    ++G+   +  
Sbjct: 328 SDADNALTAARRTFRQLFLPGMIAILADAVGFITLLIIDIGVIRELAIGASIGVAVIVFT 387

Query: 356 VICLLPPLI 364
            + LLP  I
Sbjct: 388 NLILLPVAI 396