Pairwise Alignments

Query, 321 a.a., AI-2E family transporter from Methanococcus maripaludis S2

Subject, 353 a.a., hypothetical protein from Pseudomonas simiae WCS417

 Score = 79.3 bits (194), Expect = 1e-19
 Identities = 76/331 (22%), Positives = 151/331 (45%), Gaps = 38/331 (11%)

Query: 5   FFALIYMLWPFMGIIALAVAVAYMTKPLYDILKPKFGRTYGAIICLLGIVIPSLLLVVLV 64
           F A  +++ PF   +     +A+ + PL  +L    G   G      GI+  +L  ++LV
Sbjct: 17  FGASFWVMAPFWSALFWGAVLAFASWPLMVLLTRWLG---GRESLAAGIL--TLGWMLLV 71

Query: 65  AEDVVTFLLSLDIENIITKVTPILNDIGYLRVDG-----------PDVSKPFSDIWS--- 110
           A  +V   L  ++ + +   T ++ DI   +VDG           P V +    +W    
Sbjct: 72  ALPLVW--LGFNLADHVRDATALIKDI---QVDGLPEAPTWLGSIPFVGERLVAMWDSID 126

Query: 111 -------VS-KPLL----NSFASQISSIPSLLMKLLFLSFMTFYFLKDGDKLTDSFLIYV 158
                  VS KP L    N   ++ + I   +++L       F+F +DG +L       +
Sbjct: 127 QQGAALMVSIKPYLGQVGNWLLARSAQIGGGILELTLSLVFVFFFYRDGPRLAMFVHRLL 186

Query: 159 PEDKKRNTALFLSEIHKALKTLFIGNAVTSVIVGIISIIGYWLIGIPNPITLGALSGILN 218
                     ++  +   ++ +  G   T+    ++++IG+ + G+P  + LG ++ +L+
Sbjct: 187 ERLIGDRAGYYIELVAGTVQRVVNGVIGTAAAQALLALIGFLIAGVPGALVLGIVTFLLS 246

Query: 219 ILPVVGGWTIYVPLTVYYLLTGEIAKGILLGLFGIIFLSLAPDFAIRPRVISKDGDLHPA 278
           ++P+ G   +++P T +    G+    + LG++G   +S   D  ++P +IS+ G+L   
Sbjct: 247 LIPM-GPPLVWIPATAWLAWKGDYTYAVFLGVWGTFIIS-GVDNVLKPYLISRGGNLPLV 304

Query: 279 LVLIAFLIGPLVFGIPGLAIGPIIVATVYAI 309
           +VL+    G + FG  GL IGP ++A  Y++
Sbjct: 305 IVLLGVFGGLIAFGFIGLFIGPTLLAVAYSL 335