Pairwise Alignments

Query, 413 a.a., CBS domain-containing protein from Methanococcus maripaludis S2

Subject, 331 a.a., capsule expression protein from Agrobacterium fabrum C58

 Score = 57.4 bits (137), Expect = 6e-13
 Identities = 29/84 (34%), Positives = 54/84 (64%), Gaps = 2/84 (2%)

Query: 96  VIDENDKLIGIITDYDVMKCAAESELLKDVKIDKIMTKSPVTIDIDESIGKARSLMMKYN 155
           ++DE+ +L GI+T+ D+ +  + +  L ++ +D IMT+SP T+        A + + K++
Sbjct: 246 ILDEDGRLCGIVTEGDMARNLSRN--LAELVVDDIMTRSPKTVKKSVLATSALATLEKFH 303

Query: 156 IGRLIVLDMDGKPIGMVTEDDIVK 179
           IG LIV+D D +PIG+V   D+++
Sbjct: 304 IGALIVVDDDNRPIGLVHFHDLLR 327



 Score = 29.6 bits (65), Expect = 1e-04
 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 2/52 (3%)

Query: 5   VIDIATKDVVTVSPDTPISKAVGTMENKKFHNLIVEKDDD--IYLVTMHDLL 54
           V DI T+   TV      + A+ T+E      LIV  DD+  I LV  HDLL
Sbjct: 275 VDDIMTRSPKTVKKSVLATSALATLEKFHIGALIVVDDDNRPIGLVHFHDLL 326



 Score = 28.5 bits (62), Expect = 3e-04
 Identities = 12/48 (25%), Positives = 29/48 (60%)

Query: 146 KARSLMMKYNIGRLIVLDMDGKPIGMVTEDDIVKKVFKPKTKMTVGEL 193
           +A  ++ + + G + +LD DG+  G+VTE D+ + + +   ++ V ++
Sbjct: 231 EAVGVLSRKHFGCVGILDEDGRLCGIVTEGDMARNLSRNLAELVVDDI 278