Pairwise Alignments

Query, 249 a.a., exodeoxyribonuclease III from Methanococcus maripaludis S2

Subject, 285 a.a., Exodeoxyribonuclease III from Xanthobacter sp. DMC5

 Score =  103 bits (257), Expect = 4e-27
 Identities = 74/256 (28%), Positives = 120/256 (46%), Gaps = 13/256 (5%)

Query: 1   MKMLSWNVNGIRACLKNGFMNFLERESPDIMCIQETKVQSGQVQLGL---DGYFQYWNYA 57
           +K+ ++NVNG+   L    + +L   +PD++C+QE K    +  +G     GY   W+  
Sbjct: 21  VKIATFNVNGVNGRLPV-LLRWLAEAAPDVVCLQELKAPDERFPIGAIEKAGYGAIWH-- 77

Query: 58  ERKGYSGTAIFTK-IKPNNVILGMENSEHNNEGRVITLEFDEYYLVNVYTPNSQRGL-TR 115
            +K ++G AI  +   P     G+     + + R I    +   +  +Y PN       +
Sbjct: 78  GQKSWNGVAILCRGADPIETRRGLPGDPDDAQSRYIEAAVNGILVGCLYLPNGNPAPGPK 137

Query: 116 LEYRQKWDEDFLSYIK-TLETKKPVVFCGDLNVAHKEIDLKNPKTNVKNAGFTPEERNGF 174
            +Y+  W     +Y    L+ K PV+  GD NV   ++D+ NP     +A F PE R+ F
Sbjct: 138 FDYKLAWFRRLTAYAAGLLDLKVPVLLAGDFNVMPTDLDVYNPARWQDDALFRPEVRSAF 197

Query: 175 DNIVNSGFLDTFREFNNEPDNYSWWSYRFNARARNIGWRIDYFCISKSLRNNLKDAYIMP 234
             +V+ G+ D  R  + +   Y++W Y  NA  R+ G RID+F +S  L   L  A +  
Sbjct: 198 HALVSQGWTDALRALHPDERIYTFWDYFRNAWGRDAGLRIDHFLLSPELAPRLAVADVDR 257

Query: 235 EVMG----SDHCPVGI 246
            V G    SDH P  I
Sbjct: 258 AVRGWEKASDHAPAWI 273