Pairwise Alignments

Query, 249 a.a., exodeoxyribonuclease III from Methanococcus maripaludis S2

Subject, 258 a.a., exodeoxyribonuclease III from Agrobacterium fabrum C58

 Score =  111 bits (277), Expect = 2e-29
 Identities = 78/256 (30%), Positives = 122/256 (47%), Gaps = 13/256 (5%)

Query: 1   MKMLSWNVNGIRACLKNGFMNFLERESPDIMCIQETKVQSGQV---QLGLDGYFQYWNYA 57
           MK+ ++NVNGI   L+   + +L    PD++C+QE K  + +    ++   GY   W   
Sbjct: 1   MKLATYNVNGINGRLEV-LLRWLAEAKPDVVCLQELKAPNDKFPRREIERAGYGAIWR-- 57

Query: 58  ERKGYSGTAIFTKIK-PNNVILGMENSEHNNEGRVITLEFDEYYLVNVYTPNSQRGL-TR 115
            +K ++G AI  + + P     G+     ++  R I    D   +  +Y PN       +
Sbjct: 58  GQKSWNGVAILARDQEPRETRRGLPGDPDDSHSRYIEAAIDGIVIGCLYLPNGNPAPGPK 117

Query: 116 LEYRQKWDEDFLSYIKTL-ETKKPVVFCGDLNVAHKEIDLKNPKTNVKNAGFTPEERNGF 174
            +Y+ +W E   SY   L E   PV   GD NV   ++D+  P+    +A F PE R  +
Sbjct: 118 FDYKLRWFERLYSYAAELFELDVPVALVGDFNVMPTDLDVYKPERWRDDALFRPEVRAAY 177

Query: 175 DNIVNSGFLDTFREFNNEPDNYSWWSYRFNARARNIGWRIDYFCISKSLRNNLK----DA 230
             ++  G+ D  R  + E   Y++W Y  NA AR+ G RID+F +S SLR  L+    D 
Sbjct: 178 AELIAMGWTDAVRLLHPEERIYTFWKYFRNAFARDAGLRIDHFLLSPSLRERLQTCGVDK 237

Query: 231 YIMPEVMGSDHCPVGI 246
           +       SDH PV I
Sbjct: 238 FARAWEHTSDHAPVWI 253