Pairwise Alignments

Query, 297 a.a., RluA family pseudouridine synthase from Methanococcus maripaludis S2

Subject, 211 a.a., 23S rRNA (746) and tRNA (32) pseudouridine synthase from Pseudomonas putida KT2440

 Score = 89.0 bits (219), Expect = 8e-23
 Identities = 55/210 (26%), Positives = 113/210 (53%), Gaps = 10/210 (4%)

Query: 82  LNVIYEDDDLLIVDKSKNMVVHPTKNVLSGTLANAISNHQKINNQNYK-IRFVNRLDMDT 140
           + +++ED  +L+++K   ++  P +        N      ++    Y     V+RLD +T
Sbjct: 6   VQILFEDAAILVINKPTLLLSVPGR-----AEDNKDCLITRLQENGYPDALIVHRLDWET 60

Query: 141 TGLLIVAKNSYSHQQLAKQMDEGILEKIYIAVVNGHLDLKEGIIEDSIDLNENGIKRELS 200
           +G++++A+++ SH++L++Q  +   EK Y A+  G   L  G I+  +  +     R + 
Sbjct: 61  SGIILLARDADSHRELSRQFHDRETEKAYTALCWGQPALDSGSIDLPLRYDPPTKPRHVV 120

Query: 201 NF--GKISKTKYKVIEELKNASVLEINLLTGRTHQIRVHLSSTGNYIIGDTLYGETSKLI 258
           +   GK + T ++++E   +   +E+  +TGR+HQ+RVH+ S G+ ++GD LY     L 
Sbjct: 121 DHEQGKHALTFWRIVERCGDHCRVELTPITGRSHQLRVHMLSIGHPLLGDRLYANPQALA 180

Query: 259 --DRQALHSHILRFIHPITKEKIEIISKLP 286
             +R  LH+ +L F HP++ ++++     P
Sbjct: 181 AHERLCLHASMLSFTHPVSGQRLKFECPAP 210