Pairwise Alignments

Query, 297 a.a., RluA family pseudouridine synthase from Methanococcus maripaludis S2

Subject, 327 a.a., RluA family pseudouridine synthase from Magnetospirillum magneticum AMB-1

 Score =  137 bits (345), Expect = 3e-37
 Identities = 96/293 (32%), Positives = 155/293 (52%), Gaps = 25/293 (8%)

Query: 30  ELSNKMIKKFDKENKIFVNSKNISLKS-KLKENETVSVEIDYGIN-NITPENLTLNVIYE 87
           ELS   IK   ++ ++ +    IS  S ++K  +   V++         P+++ L V+YE
Sbjct: 33  ELSRTRIKGLMEDGRVSLEETTISDASLRVKPGQCFVVDVPPDAPAQPEPQDIALTVVYE 92

Query: 88  DDDLLIVDKSKNMVVHPTKNVLSGTLANAISNHQKINNQNY----KIRFVNRLDMDTTGL 143
           D+DL+++DK   MVVHP       TL NA+  H   +        +   V+R+D DT+GL
Sbjct: 93  DEDLIVIDKPAGMVVHPAPGNPDETLVNALLAHCGESLAGIGGVKRPGIVHRIDKDTSGL 152

Query: 144 LIVAKNSYSHQQLAKQMDEGILEKIYIAVVNGHLDLKEGIIEDSIDLNENGIKR--ELSN 201
           L+ AK   +H+ LA Q     LE+ Y A+V G    ++G IE +I  N N  K+   + +
Sbjct: 153 LVAAKTDAAHRGLATQFAAHTLERAYWALVWGTPSPRQGEIEGNIGRNPNDRKKMAVVKS 212

Query: 202 FGKISKTKYKVIEELKN--ASVLEINLLTGRTHQIRVHLSSTGNYIIGDTLYGE------ 253
            GK + T+Y+V++       S++E  L TGRTHQIRVH+++ G+ ++GD +YG       
Sbjct: 213 GGKPALTRYRVLKSFAGGAVSLVECRLATGRTHQIRVHMTTQGHPLVGDPVYGRIRGHKG 272

Query: 254 -------TSKLID--RQALHSHILRFIHPITKEKIEIISKLPDDMKNLIKNLK 297
                   + LI   RQALH+++L F HP     +   S +P D+  L++ L+
Sbjct: 273 VVLPPEVKTALIQFPRQALHAYLLGFSHPTKGYDVRFESGMPLDINALMQILE 325