Pairwise Alignments

Query, 297 a.a., RluA family pseudouridine synthase from Methanococcus maripaludis S2

Subject, 364 a.a., pseudouridine synthase, RluA family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  151 bits (381), Expect = 2e-41
 Identities = 95/317 (29%), Positives = 167/317 (52%), Gaps = 31/317 (9%)

Query: 8   LNLTVDSKIAGNKLIDVLKDNF-ELSNKMIKKFDKENKIFVNSKNISLKSKLKENETVSV 66
           L + VD   A  ++   L D    ++   +++     ++ +N  N     K+K  + ++V
Sbjct: 39  LRIAVDKGQAATRVDKFLTDKVANVTRNKVQQAIDNGQVKINGSNTKANYKIKPGDVITV 98

Query: 67  --EIDYGINNITPENLTLNVIYEDDDLLIVDKSKNMVVHPTKNVLSGTLANAISNH---- 120
             E++     + PE L L++++EDD LL+V+K   MVVHP     +GTL N +  H    
Sbjct: 99  VLEMEPRETEVLPEKLDLDIVHEDDHLLVVNKPAGMVVHPAYGNWTGTLVNGLVYHFSQL 158

Query: 121 QKINNQNYKIRFVNRLDMDTTGLLIVAKNSYSHQQLAKQMDEGILEKIYIAVVNGHLDLK 180
            ++   + +   V+R+D DT+GLL++AK+  +   LAKQ  +  +E+ YIA+V G     
Sbjct: 159 PEMPGNSGRPGLVHRIDKDTSGLLVIAKSEQAMTGLAKQFFDHSIERTYIALVWGEPQED 218

Query: 181 EGIIEDSIDLNENGIKRELSNF-----GKISKTKYKVIEELKNASVLEINLLTGRTHQIR 235
            G I+  +  +    ++ +  F     GK + T +KV++ L+  S+++ NL TGRTHQIR
Sbjct: 219 AGTIDAHVGRSARD-RKVMDVFPEGDQGKNAVTHWKVLKRLRYVSLVQCNLETGRTHQIR 277

Query: 236 VHLSSTGNYIIGDTLYG------------------ETSKLIDRQALHSHILRFIHPITKE 277
            H+   G+ +  D +YG                     KL+ RQALH+  L F HPI+++
Sbjct: 278 AHMKYLGHPLFNDAVYGGDKIRKGTQFSKYKAFVNNCFKLLPRQALHAKSLGFSHPISQD 337

Query: 278 KIEIISKLPDDMKNLIK 294
            ++  S LP+DM+++++
Sbjct: 338 FLQFTSNLPEDMQSVLE 354