Pairwise Alignments

Query, 297 a.a., RluA family pseudouridine synthase from Methanococcus maripaludis S2

Subject, 357 a.a., RluA family pseudouridine synthase from Phocaeicola dorei CL03T12C01

 Score =  147 bits (372), Expect = 3e-40
 Identities = 102/290 (35%), Positives = 153/290 (52%), Gaps = 28/290 (9%)

Query: 32  SNKMIKKFDKENKIFVNSKNISLKSKLKENETVSVEIDYGI--NNITPENLTLNVIYEDD 89
           S   I+K      I  N K +    K+K  + ++V +D     N+I PE++ L+++YED+
Sbjct: 55  SRNRIQKAADAGLIMANGKPVKSSYKVKPCDVLTVMMDRPRYDNDIIPEDIPLDIVYEDN 114

Query: 90  DLLIVDKSKNMVVHPTKNVLSGTLANAISNHQKINNQ----NYKIRFVNRLDMDTTGLLI 145
           DL++++K   +VVHP      GTL NAI+ H K N +    + ++  V+R+D DT+GLL+
Sbjct: 115 DLMVINKPAGLVVHPGCGNYHGTLVNAIAWHLKDNPRYDPNDPQVGLVHRIDKDTSGLLV 174

Query: 146 VAKNSYSHQQLAKQMDEGILEKIYIAVVNGHLDLKEGIIEDSIDLNENGIKR--ELSN-- 201
           VAK   +   L  Q      ++ Y A+V G ++  EG IE +I  N     +   LS+  
Sbjct: 175 VAKTPDAKTHLGLQFYNKTTKRKYNALVWGIVENNEGTIEGNIGRNPKDRMQMAVLSDPA 234

Query: 202 FGKISKTKYKVIEELKNASVLEINLLTGRTHQIRVHLSSTGNYIIGDTLYGETSKL---- 257
            GK + T Y+V+E L   +++E  L TGRTHQIRVH+   G+ +  D  YG    L    
Sbjct: 235 QGKHAVTHYRVLERLGYVTLVECVLETGRTHQIRVHMKHIGHTLFNDERYGGNEILKGTH 294

Query: 258 --------------IDRQALHSHILRFIHPITKEKIEIISKLPDDMKNLI 293
                           RQALH+  L F+HP T E++   S LP+DM NLI
Sbjct: 295 FSKYKQFVNNCFETCPRQALHAMTLGFVHPRTGEEMFFTSPLPEDMTNLI 344