Pairwise Alignments

Query, 267 a.a., 16S ribosomal RNA methyltransferase A from Methanococcus maripaludis S2

Subject, 255 a.a., SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) from Variovorax sp. SCN45

 Score =  104 bits (260), Expect = 2e-27
 Identities = 73/217 (33%), Positives = 106/217 (48%), Gaps = 13/217 (5%)

Query: 5   KKLGQCFLKDKNFVKKAINRAEITNNDIVLEVGLGEGALTKELAKIAKKVYVIELDERLK 64
           K+ GQ FL D   +   +        D ++E+G G  ALT+ L +   ++ VIELD  L 
Sbjct: 7   KRFGQHFLSDGGIIDAIVREIAPQPGDAMVEIGPGLAALTQPLVERLGRLTVIELDRDLA 66

Query: 65  PFADEITAEFENVEIIWSDALKVDLKNLGFN------KIVANLPYQISSPITFKFLEEDF 118
               +   E   +E+I SD LKVD   L         ++V NLPY IS+PI F  L    
Sbjct: 67  ----KRLREHAQLEVIESDVLKVDFAALAERFPAKPLRVVGNLPYNISTPILFHLLGYAH 122

Query: 119 ETAV--LMYQYEFAKRMAGKPDTKEYSRLSVAVQYNADVEFICKVPPSAFSPKPDVNSAI 176
             A    M Q E   RM  KP T +YSRLSV +Q+   +E +  VPP +F P P V+SA+
Sbjct: 123 LVADQHFMLQKEVIDRMVAKPATSDYSRLSVMLQWRYRMENVLFVPPESFDPPPRVDSAV 182

Query: 177 VKLTKREPKYHVKDEEFFKKVLKAVFQHRNRTIKRAL 213
           V++        V D     ++++  F  R + ++  L
Sbjct: 183 VRMVPLAVP-PVVDAARLGEIVQVAFSQRRKLLRHTL 218