Pairwise Alignments

Query, 267 a.a., 16S ribosomal RNA methyltransferase A from Methanococcus maripaludis S2

Subject, 284 a.a., SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) from Sphingobium sp. HT1-2

 Score = 98.2 bits (243), Expect = 2e-25
 Identities = 65/222 (29%), Positives = 109/222 (49%), Gaps = 10/222 (4%)

Query: 1   MRQSKKLGQCFLKDKNFVKKAINRAEITNNDIVLEVGLGEGALTKELAKIAKKVYVIELD 60
           ++ SK LGQ FL D+  + +         +    EVG G G LT+ + +   K+  +E D
Sbjct: 21  LQASKALGQNFLLDEQLLDRIAAIPGSIQDQPAFEVGPGPGGLTRAILRAGGKLVAVERD 80

Query: 61  ERLKPFADEITAEFEN-VEIIWSDALKVDLKNLGFN--KIVANLPYQISSPITFKFLEED 117
            R  P   E+   F   + +I  DA+++D      +   I+ANLPY + + +   +L   
Sbjct: 81  RRCLPALAELELAFPGQLRVISGDAMEIDAHAEAGDGAHIIANLPYNVGTALLVGWLSAL 140

Query: 118 F------ETAVLMYQYEFAKRMAGKPDTKEYSRLSVAVQYNADVEFICKVPPSAFSPKPD 171
           +       +  LM+Q E A+R+  KP T  Y RL+V  Q+ +D     KV  SAF+P P 
Sbjct: 141 WAPLPWWSSLTLMFQMEVAERIVAKPGTDHYGRLAVLAQWRSDARIAMKVHRSAFTPPPK 200

Query: 172 VNSAIVKLTKREPKYHVKDEEFFKKVLKAVFQHRNRTIKRAL 213
           V SA+V +T + P       +  +++  A F  R + ++++L
Sbjct: 201 VMSAVVHITPK-PAPEGVQLKILERLTAAAFGQRRKMLRQSL 241