Pairwise Alignments

Query, 267 a.a., 16S ribosomal RNA methyltransferase A from Methanococcus maripaludis S2

Subject, 260 a.a., 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  106 bits (265), Expect = 4e-28
 Identities = 76/219 (34%), Positives = 112/219 (51%), Gaps = 7/219 (3%)

Query: 1   MRQSKKLGQCFLKDKNFVKKAINRAEITNN-DIVLEVGLGEGALTKELAKIAK-KVYVIE 58
           +R  K LGQ FL D+N   K + +  +  N   VLE+G G G LTK L +  + +  V++
Sbjct: 4   VRPKKHLGQHFLVDQNIAMKIVEQLTLPGNVPDVLEIGPGMGVLTKYLLQHKEYRTTVVD 63

Query: 59  LDERLKPFADEITAEFENVEIIWSDALKVDLKNL--GFNKIVANLPYQISSPITFKFLE- 115
           +D     +  +   E     II +D LK DL  L  G   I+ N PY ISS I FK LE 
Sbjct: 64  IDRESIAYLQQHFPELGE-RIISADFLKTDLSTLFPGRFAIIGNFPYNISSQIFFKVLEH 122

Query: 116 -EDFETAVLMYQYEFAKRMAGKPDTKEYSRLSVAVQYNADVEFICKVPPSAFSPKPDVNS 174
            +     V M Q E A+R+A  P +K Y  LSV +Q    +++   V    F+P P V S
Sbjct: 123 RDVVPEVVCMIQKEVAERLASPPGSKAYGILSVLLQAFYTIDYKFTVSEHVFNPPPKVKS 182

Query: 175 AIVKLTKREPKYHVKDEEFFKKVLKAVFQHRNRTIKRAL 213
           A++ L +   +    DE+ F +V+K  F  R +T++ +L
Sbjct: 183 AVIGLVRNNVEKLACDEKMFHQVVKQSFGTRRKTLRNSL 221