Pairwise Alignments

Query, 267 a.a., 16S ribosomal RNA methyltransferase A from Methanococcus maripaludis S2

Subject, 273 a.a., 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA from Escherichia coli ECRC62

 Score =  100 bits (250), Expect = 3e-26
 Identities = 67/217 (30%), Positives = 103/217 (47%), Gaps = 8/217 (3%)

Query: 5   KKLGQCFLKDKNFVKKAINRAEITNNDIVLEVGLGEGALTKELAKIAKKVYVIELDERLK 64
           K+ GQ FL D+  +   ++         ++E+G G  ALT+ + +   ++ VIELD  L 
Sbjct: 13  KRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLA 72

Query: 65  PFADEITAEFENVEIIWSDALKVDLKNLGFN-----KIVANLPYQISSPITFKFLEEDFE 119
                       + I   DA+  +   L        ++  NLPY IS+P+ F        
Sbjct: 73  ARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDA 132

Query: 120 TAVL--MYQYEFAKRMAGKPDTKEYSRLSVAVQYNADVEFICKVPPSAFSPKPDVNSAIV 177
            A +  M Q E   R+   P++K Y RLSV  QY  +V  + +VPPSAF+P P V+SA+V
Sbjct: 133 IADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVV 192

Query: 178 KLTKREPKYH-VKDEEFFKKVLKAVFQHRNRTIKRAL 213
           +L       H VKD     ++    F  R +TI+ +L
Sbjct: 193 RLVPHATMPHPVKDVRVLSRITTEAFNQRRKTIRNSL 229