Pairwise Alignments

Query, 267 a.a., 16S ribosomal RNA methyltransferase A from Methanococcus maripaludis S2

Subject, 272 a.a., 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA from Dickeya dianthicola ME23

 Score =  100 bits (249), Expect = 3e-26
 Identities = 65/217 (29%), Positives = 101/217 (46%), Gaps = 8/217 (3%)

Query: 5   KKLGQCFLKDKNFVKKAINRAEITNNDIVLEVGLGEGALTKELAKIAKKVYVIELDERLK 64
           K+ GQ FL D+  +   ++         ++E+G G GALT  + +   +  V+ELD  L 
Sbjct: 13  KRFGQNFLNDQFVIDSIVSAIHPQPGQAIVEIGPGLGALTIPVGERIDRFTVVELDRDLA 72

Query: 65  PFADEITAEFENVEIIWSDALKVDLKNLGFN-----KIVANLPYQISSPITFKFLEEDFE 119
              +      + + II  DA+ VD   L        ++  NLPY IS+P+ F        
Sbjct: 73  ARLEVHPTLKDKLTIIQQDAMTVDFAALSQQAGQPLRVFGNLPYNISTPLMFHLFSYTLA 132

Query: 120 TAVL--MYQYEFAKRMAGKPDTKEYSRLSVAVQYNADVEFICKVPPSAFSPKPDVNSAIV 177
              +  M Q E   R+   PD+K Y RLSV  QY   V  + +VPP+AF P P V+SA+V
Sbjct: 133 IRDMHFMLQKEVVNRLVAGPDSKAYGRLSVMAQYYCRVIPVLEVPPTAFKPAPKVDSAVV 192

Query: 178 KLTKREPK-YHVKDEEFFKKVLKAVFQHRNRTIKRAL 213
           +L       Y   +     ++    F  R +T++ +L
Sbjct: 193 RLVPHATSPYPAVNTRILGRITTEAFNQRRKTLRNSL 229