Pairwise Alignments

Query, 267 a.a., 16S ribosomal RNA methyltransferase A from Methanococcus maripaludis S2

Subject, 276 a.a., rRNA-adenine N6,N6-dimethyltransferase from Agrobacterium fabrum C58

 Score = 99.8 bits (247), Expect = 6e-26
 Identities = 72/220 (32%), Positives = 108/220 (49%), Gaps = 12/220 (5%)

Query: 5   KKLGQCFLKDKNFVKKAINRAEITNNDIVLEVGLGEGALTKELAKI-AKKVYVIELDERL 63
           K LGQ FL D N  +K    A   +   V+EVG G G LT+ +  + AKKV  +E D R 
Sbjct: 23  KSLGQNFLFDLNLTQKIARTAGPLDGVTVIEVGPGPGGLTRAILSLGAKKVIAVERDSRC 82

Query: 64  KPFADEITAEFEN-VEIIWSDALKVDLKNLGFN----KIVANLPYQISSPITFKFL---- 114
            P   EI A +   +E+I  DALK D + L       +I+ANLPY + + +   +L    
Sbjct: 83  LPVLAEIEAHYPGRLEVIEGDALKTDFEALVPAGEPVRIIANLPYNVGTQLLVNWLLPRE 142

Query: 115 -EEDFETAVLMYQYEFAKRMAGKPDTKEYSRLSVAVQYNADVEFICKVPPSAFSPKPDVN 173
               + +  LM+Q E  +R+  +     Y RL V   +    E    VPP AFSP P V 
Sbjct: 143 WPPFWLSMTLMFQKEVGQRIVAEEGDNHYGRLGVLAGWRTVSEMAFDVPPQAFSPPPKVT 202

Query: 174 SAIVKLTKREPKYHVKDEEFFKKVLKAVFQHRNRTIKRAL 213
           S +V L  ++ K    D    ++V +A F  R + +++++
Sbjct: 203 STVVHLLPKD-KPLPCDVAKLERVTEAAFGQRRKMLRQSV 241