Pairwise Alignments

Query, 250 a.a., AAA family ATPase from Methanococcus maripaludis S2

Subject, 404 a.a., replication protein A from Agrobacterium fabrum C58

 Score = 44.7 bits (104), Expect = 3e-09
 Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 19/186 (10%)

Query: 2   IIAVTG-KGGVGKTLLSSLIIRNLTKSGKNILAIDADPDSNLPEALGVEVTKTVG----- 55
           +IAV   KGG GKT  S+ + + L   G  +LAID DP ++L    G +    VG     
Sbjct: 121 VIAVMNFKGGSGKTTTSAHLAQYLALRGYRVLAIDLDPQASLSALFGHQPEIDVGPNETL 180

Query: 56  ------DAREELKKEVKSGNTSPEMDMWNSLDYKIMESIIETPEFDLLVMGRPEGSGCYC 109
                 D       E+  G   P + +    + ++ME   +TP     +M R  G   + 
Sbjct: 181 YGAIRYDDERRPIAEIVRGTYIPNLHIVPG-NLELMEFEHDTPR---ALMRRAPGDTLFF 236

Query: 110 AVNNMLRKIIETVSSNYDIVVIDTEAGLEHLSRRTTQNVDTLLVVTDSSKRGILTASRIK 169
           A    + + I    + YD+VVID    L +L+        ++LV        +++ ++  
Sbjct: 237 A---RIGQAIAQAQNFYDVVVIDCPPQLGYLTLSALTAATSVLVTVHPQMLDVMSMNQFL 293

Query: 170 ELAKEL 175
            +  +L
Sbjct: 294 AMTGDL 299