Pairwise Alignments

Query, 154 a.a., 4Fe-4S dicluster domain-containing protein from Methanococcus maripaludis S2

Subject, 222 a.a., Ferredoxin from Escherichia coli ECRC62

 Score = 68.6 bits (166), Expect = 6e-17
 Identities = 47/150 (31%), Positives = 64/150 (42%), Gaps = 20/150 (13%)

Query: 5   MVVDARKCTECNDCIEACKKQHGV---ARAIKTQSIPM-----------FCLQC-HPDKA 49
           M+ D  +C  CN C  AC+K + V      +    IP+           F   C H + A
Sbjct: 39  MIHDESRCNGCNICARACRKTNHVPAQGSRLSIAHIPVTDNDNETQYHFFRQSCQHCEDA 98

Query: 50  PCKQVCPVNAI-EELDGALVVNEESCILCRLCMVACPVGALTINKDAKSVQKCTLCMET- 107
           PC  VCP  A   +  G + V +  CI C  C+ ACP     +N   K   KC  C E+ 
Sbjct: 99  PCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESR 158

Query: 108 --DRMLPACVEACKSNVLKLFSVEDLEELK 135
                 P CV AC  + L +F  ED  E++
Sbjct: 159 LAKGFPPICVSACPEHAL-IFGREDSPEIQ 187



 Score = 23.5 bits (49), Expect = 0.002
 Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 4/63 (6%)

Query: 2   KSLMVVDARKCTECNDCIEACKKQHGVARAI-KTQSIPMFCLQCHPDKA---PCKQVCPV 57
           + ++ V+  +C  C+ CI AC  Q      + K      FC +    K     C   CP 
Sbjct: 114 QGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLAKGFPPICVSACPE 173

Query: 58  NAI 60
           +A+
Sbjct: 174 HAL 176



 Score = 21.6 bits (44), Expect = 0.009
 Identities = 8/24 (33%), Positives = 14/24 (58%)

Query: 61 EELDGALVVNEESCILCRLCMVAC 84
          +E+  A++ +E  C  C +C  AC
Sbjct: 33 KEVRYAMIHDESRCNGCNICARAC 56