Pairwise Alignments

Query, 260 a.a., AAA family ATPase from Methanococcus maripaludis S2

Subject, 250 a.a., AAA family ATPase from Methanococcus maripaludis S2

 Score =  140 bits (353), Expect = 3e-38
 Identities = 95/261 (36%), Positives = 156/261 (59%), Gaps = 17/261 (6%)

Query: 1   MKIAITGKGGVGKTTFSGTLACILSEKYK-VYAIDADPDMNLASSLGITEKITPISKMKD 59
           M IA+TGKGGVGKT  S  +   L++  K + AIDADPD NL  +LG+    T     ++
Sbjct: 1   MIIAVTGKGGVGKTLLSSLIIRNLTKSGKNILAIDADPDSNLPEALGVEVTKTVGDAREE 60

Query: 60  LIKERTCAEQGSSFGEVFKINPKTSDLPEKLSVNYDKNGNLKIMVMGTVEKGGTGCVCPA 119
           L KE    + G++  E+   N     L  K+  +  +     ++VMG  E  G+GC C  
Sbjct: 61  LKKE---VKSGNTSPEMDMWN----SLDYKIMESIIETPEFDLLVMGRPE--GSGCYCAV 111

Query: 120 SVLLKALIRNLILKKDEVVILDMEAGIEHLGRKTAEAVDVMIIVSEASSKSMETVERIKK 179
           + +L+ +I  +    D +V++D EAG+EHL R+T + VD +++V+++S + + T  RIK+
Sbjct: 112 NNMLRKIIETVSSNYD-IVVIDTEAGLEHLSRRTTQNVDTLLVVTDSSKRGILTASRIKE 170

Query: 180 LAEEIGI--KKIVCVLNKISNETEKSFAKENLNRIGLEILGCIPYDSEVSVA-DMKREPL 236
           LA+E+ I  K +  VLN+I  E E++  +E +   GL+I+G I YD E++ + DM+ +PL
Sbjct: 171 LAKELDISFKNLYLVLNRIKPENEEN-VRETVKDFGLDIIGII-YDDELTASYDMEGKPL 228

Query: 237 V-LYENSKAKNAIKEISEKIM 256
             L ++S+  N++ +I EKI+
Sbjct: 229 FELPDDSETVNSVSKIVEKIL 249