Pairwise Alignments

Query, 219 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 357 a.a., Putative electron transport protein YccM from Escherichia coli ECRC62

 Score = 48.9 bits (115), Expect = 1e-10
 Identities = 40/161 (24%), Positives = 70/161 (43%), Gaps = 8/161 (4%)

Query: 65  LIFGALLGYVAITRVDFCGKVCPLGTLNDLFYKVKMKISKKPLKLSLELKIILDLLKWTV 124
           L+  A +    + +  FC  +CP+GTL++L   +  K+  +   L   L I L  +K+ +
Sbjct: 102 LLLVAFIVISLLLKKAFCSWLCPVGTLSELIGDLGNKLFGRQCVLPRWLDIPLRGVKYLL 161

Query: 125 ---FLFVIIAIINGNPRFYIPIHAGELLDSIRLSLLAGGNAYYARLILVLGAISLGVVIP 181
              FL++ + +      +++      ++D   L          A LI V   +   + I 
Sbjct: 162 LSFFLYIALLMPAQAIHYFMLSPYSVVMDVKMLDFFRHMGT--ATLISVTVLLIASLFIR 219

Query: 182 RFWCRYVCPYGT---TIQLTKKGIKKVKAHTCTNCGKHDSN 219
             WCRY+CPYG     + L      +  A +C +CGK   N
Sbjct: 220 HAWCRYLCPYGALMGVVSLLSPFKIRRNAESCIDCGKCAKN 260



 Score = 29.6 bits (65), Expect = 8e-05
 Identities = 13/51 (25%), Positives = 32/51 (62%), Gaps = 2/51 (3%)

Query: 149 LDSIRLSLLAGG--NAYYARLILVLGAISLGVVIPRFWCRYVCPYGTTIQL 197
           L +++ SL+ G   + + A ++L++  I + +++ + +C ++CP GT  +L
Sbjct: 81  LMNLKYSLVTGQLPSVHAAAMLLLVAFIVISLLLKKAFCSWLCPVGTLSEL 131